Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_1202
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Entry
ECRM13514_1202 CDS
T03010
Symbol
ycdQ
Name
(GenBank) Biofilm PGA synthesis N-glycosyltransferase PgaC
KO
K11936
poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Pathway
ecoo00543
Exopolysaccharide biosynthesis
ecoo02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
ECRM13514_1202 (ycdQ)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECRM13514_1202 (ycdQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecoo01003
]
ECRM13514_1202 (ycdQ)
Glycosyltransferases [BR:
ecoo01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
ECRM13514_1202 (ycdQ)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Glyco_transf_21
Glyco_tranf_2_2
Chitin_synth_2
Glyco_tranf_2_4
Cellulose_synt
Motif
Other DBs
NCBI-ProteinID:
AHG07885
LinkDB
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Position
complement(1224890..1226128)
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AA seq
412 aa
AA seq
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MMRFVFFWPFFMSIMWIVGGVYFWVYRERHWPWGENAPAPQLKDNPSISIIIPCFNEEKN
VEETIHAALAQRYENIEVIAVNDGSTDKTRAILDRMAAQIPHLRVIHLAQNQGKAIALKT
GAAAAKSEYLVCIDGDALLDRDAAAYIVEPMLYNPRVGAVTGNPRIRTRSTLVGKIQVGE
YSSIIGLIKRTQRIYGNVFTVSGVIAAFRRSALAEVGYWSDDMITEDIDISWKLQLNQWT
IFYEPRALCWILMPETLKGLWKQRLRWAQGGAEVFLKNMTRLWRKENFRMWPLFFEYCLT
TIWAFTCLVGFIIYVVQLAGVPLNIELTHIAATHTAGILLCTLCLLQFIVSLVIENRYEH
NLTSSLFWIIWFPVIFWMLSLATTLVSFTRVMLMPKKQRARWVSPDRGILRG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggttcgttttcttctggccgttttttatgtccatcatgtggattgttggcggc
gtctatttctgggtctatcgtgaacgccactggccgtggggggaaaacgcaccagctccc
cagttgaaagataatccgtctatctccattatcattccctgttttaatgaggagaaaaac
gttgaggaaaccatacacgccgctttagcacagcgttatgagaacattgaagttattgcc
gtaaatgacggttcaacagataaaacccgtgccatcctggatcgcatggctgcacaaatt
ccccatttgcgggtcattcatctggcgcaaaaccaggggaaagccattgcgcttaaaacc
ggagctgccgcggcgaaaagtgaatatctggtgtgcattgatggcgacgcgttattagac
cgcgatgcggcggcatatattgtggaaccgatgttgtacaacccgcgtgtgggtgccgta
accggtaatcctcgtattcgcacacgttctaccctcgtgggtaaaattcaggttggcgag
tattcctcaattattggtttgatcaagcgaacccagcgtatctatggaaacgtatttacc
gtttccggtgttattgccgcatttcgtcgcagcgccctggcagaagtgggttactggagt
gacgatatgatcaccgaagatattgatattagctggaagctgcagttaaatcagtggacg
attttttacgagcctcgggcgctgtgctggatattaatgcctgaaacgttaaaagggctg
tggaaacagcgcctgcgctgggctcagggcggtgcagaagtattcctcaaaaatatgaca
aggctatggcgcaaagaaaactttcgaatgtggccactgttttttgaatactgtctgacg
acaatatgggcctttacctgcctggtcggtttcattatttacgtagtccaacttgcaggt
gtaccgttaaatattgaattgacacatatcgctgcgacacatactgccggaatattattg
tgtacgttatgtttactgcaatttattgtcagcctggtgattgagaatcgctatgagcat
aatctgacttcatcgcttttctggattatttggttcccggttattttctggatgctgagc
ctggcaacgacattggtatcatttacacgagtcatgttgatgcctaaaaagcaacgcgcc
cgttgggtaagtcctgatcgcgggattctgagaggttaa
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