Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_1406
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Entry
ECRM13514_1406 CDS
T03010
Symbol
ycfS
Name
(GenBank) L,D-transpeptidase YcfS
KO
K19236
L,D-transpeptidase YcfS
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Pathway
ecoo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
ECRM13514_1406 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecoo01002
]
ECRM13514_1406 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecoo01011
]
ECRM13514_1406 (ycfS)
Peptidases and inhibitors [BR:
ecoo01002
]
Cysteine peptidases
Family C82
ECRM13514_1406 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
ecoo01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ECRM13514_1406 (ycfS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
AHG08091
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All DBs
Position
complement(1394858..1395817)
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AA seq
319 aa
AA seq
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MIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIAK
KYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKN
SVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPD
NPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNII
NTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKNAAQTDAEVMQHVMD
VRSGMPVDVRRHQVSPQTL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaacgcgtttttctcgctggctaacgttttttacgttcgccgctgccgtggcg
ctggcgctaccggcaaaagccaacacctggccgctgccgccagcgggcagtcgtctggtt
ggcgaaaacaaatttcatgtggtggaaaatgacggtggttctctggaagccatcgccaaa
aaatataacgtcggctttctcgctctgttacaggctaaccccggcgttgatccttacgta
ccgcgcgcgggcagcgtgttaacgatcccgttgcaaaccctacttccagacgcgccgcgt
gaaggcattgtgatcaacattgctgagctgcgtctctattactacccgccgggtaaaaat
tcggtaaccgtgtatccaataggtattggtcagttaggtggtgacacgctgacaccgaca
atggtgaccaccgtttcagacaaacgtgcaaacccaacctggacgccaacggcaaacatc
cgcgcccgttataaagcacagggaattgagttgcctgcggtagtgccggctggaccggat
aacccaatgggccatcatgcgattcgtctggcggcctatggcggcgtttatttgcttcat
ggtacgaacgccgatttcggcattggcatgcgggtaagttctggctgtattcgtctgcgg
gatgacgatatcaaaacactctttagccaggtcaccccaggcaccaaagtgaatatcatc
aacactccgataaaagtctctgccgaaccaaacggtgcgcgtctggttgaagtacatcag
ccgctgtcagagaagattgatgacgatccgcagctgctgccaattacgctgaatagcgca
atgcaatcatttaaaaatgcagcacaaactgacgctgaagtgatgcaacatgtgatggat
gtccgttccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaactctgtaa
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