Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_1959
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Entry
ECRM13514_1959 CDS
T03010
Name
(GenBank) ABC transporter, periplasmic binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Pathway
ecoo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECRM13514_1959
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecoo02000
]
ECRM13514_1959
Transporters [BR:
ecoo02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ECRM13514_1959
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GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SBP_bac_6
Phosphonate-bd
Glyco_hydro_62
Ral
Motif
Other DBs
NCBI-ProteinID:
AHG08638
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Position
complement(1918953..1920098)
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AA seq
381 aa
AA seq
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MCKTFARSSLCALSMTIMTAHAAEPPTNLDKPEGRLDIIAWPGYIERGQTDKQYDWVTQF
EKETGCAVNVKTAATSDEMVSLMTKGGYDLVTASGDASLRLIMGKRVQPINTALIPNWKT
LDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPPDSWQVVFVEQNLPDGKSNKG
RVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRAQHSLIHRYWHDTT
VQMSDFKNEGVVASSAWPYQANALKAEGQPVATVFPKEGVTGWADTTMLHSEAKHPVCAY
KWMNWSLTPKVQGDVAAWFGSLPVVPQGCKASPLLGEKGCETNGFNYFDKIAFWKTPIAE
GGKFVPYSRWTQDYIAIMGGR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaagacatttgcccgcagcagcctgtgtgcgctcagcatgacaataatgaccgct
cacgccgccgaaccacctaccaatttagataaaccggaagggagactggatattatcgcc
tggccgggatatatcgaacgcggacaaactgataaacaatacgactgggtaacgcaattc
gaaaaagagacaggctgcgcggtgaatgttaaaaccgccgcgacttccgatgaaatggtc
agtctgatgaccaaagggggttacgatctggttacggcatccggcgatgcctcgctgcgt
ttgattatgggtaaacgcgtgcagccgattaataccgcattgattcccaactggaaaacg
ctcgatccgcgcgtggttaaaggcgactggtttaacgtgggcggcaaagtctatggcacg
ccatatcaatggggtccgaacctgctgatgtacaacactaaaaccttcccgacgccgccg
gatagctggcaagtggtttttgttgagcaaaatctgccggacggcaagagcaataaaggc
cgcgttcaggcttatgatggccctatctacattgcggacgctgcgttgttcgttaaagcc
actcagccgcagttgggcatcagcgatccgtatcaactcaccgaagaacagtaccaggcg
gtgctgaaagtgctgcgcgctcaacatagtttgatccatcgctactggcatgacactacc
gtgcaaatgagcgatttcaaaaacgagggtgtggttgcttccagtgcatggccctatcag
gccaacgccttgaaagccgaaggccagcctgtcgctaccgttttcccgaaggagggcgtt
accggttgggctgacaccaccatgctacatagcgaagcgaaacatccggtttgcgcctac
aaatggatgaactggtcattaacgccaaaagtgcagggcgatgtggcggcctggtttggc
tcgttaccggtagtgccgcaagggtgtaaagccagtccgttattaggcgaaaaaggttgt
gaaaccaacggttttaactatttcgataaaatagccttctggaaaacgcctatagcagaa
gggggcaagtttgttccctacagtcgctggacgcaggattacattgccattatgggcggt
cgctaa
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