Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_1963
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Entry
ECRM13514_1963 CDS
T03010
Symbol
ydcP
Name
(GenBank) putative collagenase
KO
K24847
23S rRNA 5-hydroxycytidine C2501 synthase
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecoo01002
]
ECRM13514_1963 (ydcP)
Peptidases and inhibitors [BR:
ecoo01002
]
Peptidases of unknown catalytic type
Family U32
ECRM13514_1963 (ydcP)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_U32
DUF3656
Motif
Other DBs
NCBI-ProteinID:
AHG08643
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Position
complement(1923011..1924972)
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AA seq
653 aa
AA seq
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MTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASNSLKDIAELVPFAHR
YGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGILELDIPPIELHASTQCD
IRTVEKAKFLSDVGFTQIVLARELNLDQIRAIHQATDATIEFFIHGALCVAYSGQCYISH
AQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLSMKDNDQTANLGALIDAGVRSFK
IEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARASSGRTEHFFVPSTEKTFHRGSTDYF
VNARKGDIGAFDSPKFIGLPVGEVVKVAKDHLDVAVTEPLANGDGLNVMIKREVVGFRAN
TVEKTGENQYRVWPNEMPADLHKIRPHHPLNRNLDHNWQQALTKTSSERRVAVDIELGGW
QEQLILTLTSEEGVSITHTLDGQFDEANNAEKAMNNLKDGLAKLGQTIYYARDVQINLPG
ALFVPNSLLNQFRREAADMLDAARLASYQRGSRKPVADPAPVYPQTHLSFLANVYNQKAR
EFYHRYGVQLIDAAYEAHEEKGEVPVMITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVN
GDEVLTLKFDCRPCEMHVIGKIKNHILKMPLPGSVVASVSPDELLKTLPKRKG
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtatcttctcatcgacttgaactgttaagcccggcacgcgatgccgccattgcc
cgcgaagctattttgcacggtgccgatgctgtttatatcggcggcccaggttttggtgcc
cgtcataatgccagtaatagcctgaaagatattgccgagctggtgccgtttgcccatcgt
tatggtgcaaaaattttcgtcacgcttaacaccattttgcatgatgatgagctggaaccc
gcgcaacggctgattactgacctctaccagaccggtgtcgatgcgctgattgttcaggat
atggggattctggaacttgatattccgccgattgaactgcacgccagtacgcagtgcgac
attcgtacagtagaaaaagcgaagttcctctctgatgttggcttcacgcagattgtgctg
gcgcgagagctgaatcttgatcagatccgcgcgattcaccaggctacggacgcgaccatt
gaattctttattcatggggcactgtgcgtggcctattcgggtcagtgctacatttctcat
gcgcaaacagggcgtagtgccaaccgtggcgattgctcgcaggcgtgccgtttgccatac
acattgaaagacgatcaggggcgggtggtttcctatgaaaaacatctgctgtcgatgaaa
gataacgatcagactgccaacctcggcgcgctgattgatgctggtgtacgctccttcaag
attgaggggcgttacaaagatatgagctacgtgaagaatatcaccgcccattatcgccag
atgcttgatgccattattgaagaacgtggcgatctggcgcgcgcttcatcaggtcgtact
gaacatttctttgttccatcgacggaaaagactttccaccgtggtagcacagattatttt
gtgaatgcccgtaaaggcgatattggcgcgttcgattcgccgaaatttatcggcctgccg
gtaggcgaagtagtgaaagtggcgaaagatcatctcgatgttgccgtcaccgagccactg
gcaaatggtgatggcctgaacgtgatgattaaacgtgaagtcgtcggttttcgtgccaat
acggtcgagaaaaccggagaaaatcagtaccgcgtctggcccaatgaaatgccagcagat
ttgcacaaaattcgcccgcatcacccactaaaccgtaatcttgatcataactggcagcag
gcactgacaaaaacctccagcgaacgtcgggtggcggtagacattgaactgggcggttgg
caggagcaattgattctgactctcaccagtgaagagggggtcagcataacgcatacgctg
gatgggcagttcgacgaagccaataacgccgaaaaagcaatgaacaatctgaaggatggt
ctggcaaaactggggcaaaccatctattacgcccgcgatgtgcaaattaatttgccgggg
gcgctgtttgtaccaaacagtctgttaaaccagttccgccgtgaagctgccgacatgctg
gatgctgcgcgtcttgccagttaccagcgcggcagccgtaaaccggttgctgatcctgcg
ccggtttatccgcaaacacatctgagtttcctcgcgaacgtttacaaccagaaagcgcgt
gaattttatcatcgctatggtgtgcagctgattgacgcggcgtatgaggcacatgaagag
aagggcgaagtcccggtgatgatcaccaagcattgtctgcgctttgcctttaatctgtgc
ccgaaacaggcgaaaggcaatatcaaaagctggaaggctacgccaatgcaactggttaac
ggcgatgaagtattaacgctaaagtttgattgccgcccatgcgagatgcacgtcattggc
aaaatcaaaaatcacatactgaaaatgccgttaccgggaagcgtagtggcatccgtaagt
ccggatgagctgctgaaaacattgccgaagcgaaaagggtaa
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