Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_2308
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Entry
ECRM13514_2308 CDS
T03010
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Pathway
ecoo00061
Fatty acid biosynthesis
ecoo00071
Fatty acid degradation
ecoo01100
Metabolic pathways
ecoo01212
Fatty acid metabolism
ecoo02024
Quorum sensing
ecoo04146
Peroxisome
Module
ecoo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ECRM13514_2308 (fadD)
00071 Fatty acid degradation
ECRM13514_2308 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ECRM13514_2308 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECRM13514_2308 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ecoo01004
]
ECRM13514_2308 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecoo04147
]
ECRM13514_2308 (fadD)
Enzymes [BR:
ecoo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ECRM13514_2308 (fadD)
Lipid biosynthesis proteins [BR:
ecoo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ECRM13514_2308 (fadD)
Exosome [BR:
ecoo04147
]
Exosomal proteins
Exosomal proteins of breast milk
ECRM13514_2308 (fadD)
Exosomal proteins of breast cancer cells
ECRM13514_2308 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AHG08988
LinkDB
All DBs
Position
complement(2266344..2268029)
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AA seq
561 aa
AA seq
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MKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVNMGEVMTFRKLEERSRA
FAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDS
GASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHL
PDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNA
TYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAKYPF
TAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLLEGYGLT
ECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQ
RPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGV
QEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSN
VGKILRRELRDEARGKVDNKA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaggtttggcttaaccgttatcccgcggacgttccgacggagatcaaccctgac
cgttatcaatctctggtagatatgtttgagcagtcggtcgcgcgctacgccgatcagcct
gcgtttgtgaatatgggggaggtgatgaccttccgcaagctggaagagcgcagtcgcgcg
tttgccgcttatttgcaacaagggttggggctgaagaaaggcgatcgcgttgcgctgatg
atgcctaacttattgcaatatccagtggcgctgtttggcattttgcgcgccgggatgatt
gtcgtaaacgtcaacccgttgtataccccgcgcgagcttgagcatcagcttaacgatagt
ggcgcatcggcgattgttatcgtgtctaactttgcccacactctggaaaaggtagttgat
aaaaccgccgttcagcacgtaattctgacccgtatgggcgatcagctatctacggcaaaa
ggcacggtagtcaatttcgttgttaaatacatcaagcgtttggtgccgaaataccatctg
ccagatgccatttcatttcgtagcgcactgcataacggctaccggatgcagtacgtcaaa
cccgaactggtgccggaagatttagccttcctgcaatacaccggcggcaccacaggtgtg
gcgaaaggcgcgatgctgactcaccgcaatatgctggcgaacctggaacaggtcaacgct
acctatgggccgttgctgcatccaggtaaagaactggtagtaacggcactgccgctgtat
cacatttttgccctgaccattaactgcctgctgtttatcgaactgggtgggcagaacctg
cttatcactaacccgcgtgatattccagggttggtaaaagagttagcgaaatatccgttt
accgctatcactggcgttaacaccttgttcaatgcgttgctgaacaataaagagttccag
cagctggatttctccagtctgcatctttccgcaggcggtgggatgccagtgcagcaagtg
gtggcagagcgttgggtgaaactgacaggacagtatctgctggaaggctatggccttacc
gagtgtgcgccgctggtcagcgttaacccatatgatattgattatcatagtggtagcatc
ggtttgccggtgccgtcgacggaagccaaactggtggatgatgatgataatgaagtacca
ccgggtcaaccgggtgagctttgtgtcaaaggaccgcaggtgatgctgggttactggcag
cgtccggatgctacagatgagatcatcaaaaatggctggttacacaccggcgacatcgcg
gtgatggatgaagaagggttcctgcgcattgtcgatcgtaaaaaagacatgattctggtt
tccggttttaacgtctatcccaacgagattgaagatgtcgtcatgcagcatcctggcgta
caggaagtcgcggctgttggcgtaccttccggctccagtggtgaagcggtgaaaatcttc
gtagtgaaaaaagatccatcgcttaccgaagagtcactggtgaccttttgccgccgtcag
ctcacgggctacaaagtaccgaagctggtggagtttcgtgatgagttaccgaaatctaac
gtcggaaaaattttgcgacgagaattacgtgacgaagcgcgcggcaaagtggacaataaa
gcctga
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