Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_2516
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Entry
ECRM13514_2516 CDS
T03010
Symbol
vsr
Name
(GenBank) Very-short-patch mismatch repair endonuclease (G-T specific)
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecoo03400
]
ECRM13514_2516 (vsr)
DNA repair and recombination proteins [BR:
ecoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
ECRM13514_2516 (vsr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
AHG09195
LinkDB
All DBs
Position
complement(2447949..2448419)
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AA seq
156 aa
AA seq
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MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV
IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR
GREKLTDEALSERLEEWICGEGASAQIDTQGIHLLA
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgttcacgataaggccactcgcagcaaaaatatgcgcgcgattgccacgcgt
gatacggcgattgagaagcgcctcgccagtctgttaaccgggcagggcctggcgtttcgc
gttcaggacgccagtctgcccggacgcccggattttgtcgttgatgaatatcgctgcgtg
atatttacccatggctgcttctggcatcatcatcactgctatctgtttaaagtgcctgcg
actcgaaccgagttctggctggagaagataggtaaaaatgttgagcgcgatcgccgcgat
atcagtcgcttgcaggaactcggctggcgcgtattgattgtctgggagtgcgcgttacgt
gggcgcgagaagctgacggatgaagcgcttagcgagcgtctggaagagtggatctgcggc
gaaggtgccagcgcgcagatcgacacgcaggggattcatttactcgcttga
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