Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_2655
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Entry
ECRM13514_2655 CDS
T03010
Symbol
dacD
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Pathway
ecoo00550
Peptidoglycan biosynthesis
ecoo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ECRM13514_2655 (dacD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecoo01002
]
ECRM13514_2655 (dacD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecoo01011
]
ECRM13514_2655 (dacD)
Enzymes [BR:
ecoo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ECRM13514_2655 (dacD)
Peptidases and inhibitors [BR:
ecoo01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
ECRM13514_2655 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ecoo01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
ECRM13514_2655 (dacD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AHG09328
LinkDB
All DBs
Position
complement(2563818..2564861)
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AA seq
347 aa
AA seq
DB search
MDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPV
FVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHL
KDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL
WDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEAKKLLRWGQQN
FTTVQILHRRKKVGTERIWYGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLNGKELTAP
ISAHQRVGEIELYDRDKQVAHWPLVTLESVGEGSMFSRLSDYFHHKA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggattacaccaccggacagatcctcaccgcgggtaatgagcatcaacagcgcaatccc
gccagcctgacaaagctgatgacgggttatgtcgtggatcgcgctatcgatagtcatcgc
attacgccagacgatattgtcaccgtggggcgcgatgcgtgggcgaaagataatccggtg
tttgtcggttcttcactgatgtttttgaaagagggcgatcgcgtatcggtacgtgattta
agccgtggtttaattgtggattccggaaatgacgcttgtgttgctctggctgactatatt
gccggtgggcaacggcagtttgttgaaatgatgaacaactatgccgagaagctgcatctc
aaggatacgcattttgaaacagtgcatggtctggatgcacctggccagcatagctcggct
tatgatttagccgtgctttctcgcgctatcatccacggcgagcccgagttttatcatatg
tacagtgagaaaagtctcacctggaacggtatcacccagcaaaaccgtaacgggttattg
tgggataagaccatgaatgttgacggcctgaaaacgggccatacttctggtgccgggttt
aatcttattgcttcggctgtagacgggcagcgtcgcctcattgcagtggtaatgggtgct
gacagcgcaaaaggtcgtgaggaagaggcaaaaaaattactgcgttgggggcaacaaaac
tttactacggtgcaaattttgcaccgtaggaaaaaggtcggtacggaacgcatctggtat
ggtgataaagaaaatatcgccctgggaacggaacaagagttctggatggtgctaccgaaa
gccgaaattccacatatcaaagccaaatatacccttaatggtaaagagctcaccgcgcca
attagcgcccatcagcgggtaggggaaattgaactttacgaccgtgataaacaggtggcg
cactggccgctggttaccctggaatctgtcggggaaggcagcatgttttctcgcctgagt
gattatttccaccataaggcctga
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