Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_2789
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Entry
ECRM13514_2789 CDS
T03010
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Pathway
ecoo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECRM13514_2789 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecoo03400
]
ECRM13514_2789 (alkA)
Enzymes [BR:
ecoo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ECRM13514_2789 (alkA)
DNA repair and recombination proteins [BR:
ecoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ECRM13514_2789 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AHG09461
LinkDB
All DBs
Position
complement(2678196..2679044)
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AA seq
282 aa
AA seq
DB search
MYTLNWQPPYDWSWMLGFLAARAVSGVETVADSYYARSLAVGEYRGVVTAVPDIARHTLH
INLSVGLEPVAAECLAKMSRLLDLQCNPQIVNGALGKLGAARPGLRLPGSVDAFEQGVRA
ILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAE
ALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGSWTANYFALRGWQAKDVFLPDDYL
IKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtataccctgaactggcagccgccgtatgactggtcgtggatgttgggatttctcgcc
gcccgtgcggtgagcggtgtggaaacggtcgcggacagttattatgcccgtagtctggcg
gtgggcgaatatcgcggcgtggtgactgctgttccggatatagcccgccatactctgcac
ataaatttaagtgtaggtttagaacccgttgccgctgagtgtctggcgaaaatgagccgc
ctgcttgatctgcaatgtaacccgcagattgttaacggtgcgttgggcaagttaggcgcg
gcgcggcccggattgcgtttacccggcagtgttgatgcttttgagcagggcgtgcgggcg
attttaggccaactggtgagcgtggcgatggcggcaaaattgaccgccagagtggcacag
ctttatggcgaacggctggatgattttccggagtatatctgcttccccacgcctcagcgg
ctggcagcagcagacccgcaggcattaaaagcgttaggtatgccgttgaaacgggcagag
gcgctgattcatctggcaaatgcggcgctggagggcaccttaccaatgacaataccgggc
gatgtggagcaggcgatgaaaacgctgcaaacttttccgggtatcgggagctggacggcg
aattattttgctttgcgtggctggcaggcgaaagatgttttcctgccggatgattatctg
attaaacagcgatttccgggaatgacaccggcgcaaatccgccgttatgccgagcgctgg
aagccctggcgttcttatgcgctgttgcatatctggtatacggaaggctggcagccagac
gaagcatga
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