KEGG   Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_3498
Entry
ECRM13514_3498    CDS       T03010                                 
Symbol
ygaF
Name
(GenBank) L-2-hydroxyglutarate oxidase
  KO
K15736  (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
Organism
ecoo  Escherichia coli O145:H28 RM13514 (EHEC)
Pathway
ecoo00310  Lysine degradation
ecoo01100  Metabolic pathways
ecoo01120  Microbial metabolism in diverse environments
Module
ecoo_M00956  Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:ecoo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    ECRM13514_3498 (ygaF)
Enzymes [BR:ecoo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.5  With a quinone or similar compound as acceptor
    1.1.5.13  (S)-2-hydroxyglutarate dehydrogenase
     ECRM13514_3498 (ygaF)
SSDB
Motif
Pfam: DAO Pyr_redox_2 Mqo Amino_oxidase NAD_binding_8 FAD_binding_2 Thi4 Trp_halogenase
Other DBs
NCBI-ProteinID: AHG10162
LinkDB
Position
3407894..3409162
AA seq 422 aa
MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESGPACHQTGHNSGVIHAGVYYTPGS
LKAQFCQAGNRVTKAFCDQNGIRYDNCGKMLVATSELEMERMCALWERTAANGIEREWLN
ADELREREPNITGLGGIFVPSSGIVSYREVTAAMAKIFQARGGEIIYNAEVSGLSEHKNG
VVIRTRQGGEYEASTLISCSGLMADRLVKMLGLEPGFIICPFRGEYFRLAPEYNQIVNHL
IYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSFSDTLEILGSSGIRR
VLQNNLRSGLGEMKNSLCKSGYLRLVQKYCPRLSLSDLQPWPAGVRAQAVSPDGKLIDDF
LFVTTPRTIHTCNAPSPAATSAIPIGAHIVSKVQTLLASQSNPGRTLRAARSVDALHAAF
NQ
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactg
attgatgtctatccggatgcccgcattgcgttgctggaaaaagagtccggcccggcctgt
caccagacgggccacaacagcggcgtgatccatgccggggtctattacacgcccggcagc
ctgaaggcgcagttttgccaggcgggaaaccgcgtcaccaaagccttttgcgatcaaaac
ggcattcgctacgacaactgcggcaagatgctggtcgccacgtctgaactcgaaatggaa
cggatgtgcgccttatgggaacgcacggcggcgaacggtatcgagcgcgagtggctaaac
gccgatgaactgcgcgagcgcgaaccgaatatcaccgggcttggcggtatttttgtgccg
tccagcggcattgtcagctaccgcgaagtcacggcggcgatggcaaaaatcttccaggcc
agaggcggcgagattatctataacgccgaagtcagcggccttagtgagcataaaaacggc
gtggtgatacgtacccgtcagggtggcgaatacgaagcgtcaacgctgattagctgttcc
gggctgatggctgaccggctggtgaaaatgctcggcctcgaaccgggctttattatctgc
ccgttccgtggcgagtatttccgcctggcgccggagtataaccagattgttaaccatctg
atttaccccattcccgaccccgcaatgccgtttttgggcgttcatctcacccgcatgatc
gacggcagcgtgaccgtcgggccaaacgcggtgctggctttcaaacgcgaaggctatcgc
aagcgcgacttctcatttagcgacacgctggagattttaggctcgtcggggattcgccgg
gtgctgcaaaacaatctacgctcaggactgggcgagatgaaaaactcgctgtgcaagagc
ggctatctgcggctggtgcaaaagtattgtccccggctttcgttaagcgatctccagccc
tggcccgccggtgtgcgggcgcaggcggtatcgccggacggcaagctgattgacgatttt
ctgtttgtcaccaccccgcgcacgatccacacctgcaatgcgccctccccggcagcgaca
tcagcaattcctattggtgcgcatattgtcagcaaggtacaaacgctgttggcaagccag
agtaaccccggacgcacgctgcgagcggcacgtagtgtggatgccttacacgccgcattt
aatcaataa

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