Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_3644
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Entry
ECRM13514_3644 CDS
T03010
Symbol
rumA
Name
(GenBank) 23S rRNA (Uracil-5-) -methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecoo03009
]
ECRM13514_3644 (rumA)
Enzymes [BR:
ecoo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ECRM13514_3644 (rumA)
Ribosome biogenesis [BR:
ecoo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ECRM13514_3644 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
PCMT
RrnaAD
TRM5-TYW2_MTfase
Methyltransf_11
MTS
Methyltransf_15
Cons_hypoth95
Methyltr_RsmB-F
Methyltransf_23
Methyltransf_4
FtsJ
Ubie_methyltran
Methyltrans_SAM
PrmA
CMAS
Motif
Other DBs
NCBI-ProteinID:
AHG10303
LinkDB
All DBs
Position
complement(3536193..3537494)
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AA seq
433 aa
AA seq
DB search
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQ
YARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVI
ADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPQLEALLPKVRACL
GSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILE
TVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNF
TLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKV
LLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHT
GHLESMVLFSRVK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacgacgcacgacgacgcgtcagatcataaccgtttca
gtcaacgacctcgactcttttggtcagggcgtggcgcgacataacggcaaaacgctattt
atccccggattattgccgcaggaaaacgcggaagttactgttactgaagataaaaaacag
tatgcccgcgctaaagtcgtacgccggttaagcgatagcccggaacgcgaaacgccacgc
tgtcctcattttggcgtatgcggcggctgtcagcaacaacacgccagcgtggatttacag
cagcgaagcaaaagtgcggcactcgcccgattaatgaaacacgaagtctctgaagtgatc
gccgatgttccctggggctatcgccgtcgcgcgcgtttaagtctgaactacttaccgaaa
acacagcaacttcagatggggtttcgcaaagcgggctccagtgacattgtcgacgttaaa
caatgccccattttagtgccccaacttgaagcattgctgcccaaagtcagggcatgcctg
ggcagcttacaagctatgcgccatcttggtcatgttgaactggtacaggcaaccagcggc
acgctgatgattttgcgccataccgcaccgctaagttcggcagatcgcgaaaaactggaa
cgcttttcgcattctgaaggcctggatctgtatctcgcccccgatagtgagatactcgaa
accgtctctggtgagatgccctggtatgactcaaacgggttgcgcttaacttttagcccg
cgcgattttattcaggtcaatgcgggtgtgaaccaaaaaatggtagcgcgtgcgttggaa
tggctggatgtgcaacctgaagatcgcgtactggatctgttctgcggtatgggcaacttt
acactgccattggcgacacaagcagccagtgtggtgggtgtagaaggtgttccggcgctg
gtggaaaaaggccagcagaatgcgcgtcttaatggcttacagaatgtgacgttttatcat
gaaaatcttgaagaagatgtcacaaagcagccgtgggcgaaaaacggcttcgataaagtg
ttgctggacccggcgcgagcaggtgccgcaggtgttatgcagcaaattataaaactggaa
cctattcgtatagtttatgtatcctgtaaccctgcaacgctggctcgggatagcgaagcg
ttattaaaagcaggatataccattgcgcgactggcgatgctggatatgttcccacacacg
ggacatctggaatcgatggtacttttctcgcgcgttaaatag
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