KEGG   Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_3714
Entry
ECRM13514_3714    CDS       T03010                                 
Name
(GenBank) Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
  KO
K03230  type III secretion protein V
Organism
ecoo  Escherichia coli O145:H28 RM13514 (EHEC)
Pathway
ecoo03070  Bacterial secretion system
Module
ecoo_M00542  EHEC/EPEC pathogenicity signature, T3SS and effectors
Brite
KEGG Orthology (KO) [BR:ecoo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    ECRM13514_3714
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ecoo02044]
    ECRM13514_3714
Secretion system [BR:ecoo02044]
 Type III secretion system
  Type III secretion core apparatus
   ECRM13514_3714
SSDB
Motif
Pfam: FHIPEP DUF6097
Other DBs
NCBI-ProteinID: AHG10371
LinkDB
Position
complement(3612115..3613734)
AA seq 539 aa
MPGKQMSIDADLRAGIIDADLAKERRSVLERESQLYGSFDGAMKFIKGDAIANIIIIFVN
IIGGLSVGVGQNGMDFSTALTVYTILTVGDGLVSQIPALLIAISAGFIVTRVNGDSDNMG
QNIMSQLLSNSFVIIVTCVLALSIGLLPGFPLLVFLCLAVILGIYFYFKFKKKGTEETVV
EGDITVGLEPYNQDDDISLGIINKLDQVITETVPLVLIMNSVQAKKYTEINLADRIRSQF
FIEYGIRIPGIVIREGEGLNDEDVILMLNEVRASQFKIYHDLVLLVEYSDEVVSTLIKKP
VIVNSNGEQYYWVTKSDAQKLTKIGCYTRTAMDEMYNHLSVCLAHNINEYFGIQETKYIL
DQLEMKYPDLLKEILRYITVQRISEVIQRLIQERISVRNMRLVMEALALWSPREKDIITL
VEHVRGALGRYICHKFSYSGEIKAIVISPEIEDRIRDGVRPTAGGTFLNLDASEAEMILD
NFKLALSGINIPIKDIILLGSVDIRRFIKKLIESSYRDLEVLSYGELTENVPVNILKTI
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgccaggtaaacaaatgagcattgatgccgatctacgcgctgggatcattgatgcagat
ttagcaaaagaacgtcgtagcgtattagaacgagagagtcagctgtatggttcctttgat
ggtgcgatgaaatttatcaaaggcgatgctattgcaaacattattattatatttgttaat
attatcggtgggctatcagtaggagtaggccaaaatggaatggatttctcaacagcgctg
accgtctacacaattcttaccgtcggtgatggtcttgtttctcaaattccagctttatta
attgctattagcgcaggatttatcgtaacgcgcgtaaatggcgatagtgataatatgggg
caaaatataatgtcccagttattaagtaattcttttgtcattattgtgacatgtgtcctc
gcgctaagtattgggttacttccaggttttccccttcttgtgtttttatgtttggcagtg
atcttaggaatttacttttactttaaattcaaaaagaaagggactgaagaaacggttgtt
gagggagatattaccgttgggttggaaccctataatcaagatgatgatatctcattaggt
atcattaataaacttgatcaggttattaccgaaacggtacccttggtcttgattatgaat
agtgtacaggctaaaaaatacactgaaatcaatcttgctgataggattcgtagtcagttt
tttattgagtatggtatccgcattcccggtattgtcattcgtgagggggaaggtcttaat
gatgaagatgtcatattaatgctaaatgaagtcagagcttcgcaatttaaaatttatcat
gatcttgtcttgttggttgaatattcagatgaagtggtttcgactttgatcaagaaacct
gtcattgtaaatagtaatggtgaacaatattattgggttacgaaaagtgatgctcaaaaa
ttaacaaaaattggctgttatactcgcacggccatggatgaaatgtataatcatttatct
gtctgtctggctcataatattaatgagtactttggtatacaagaaacaaaatatattctt
gatcaattagagatgaagtatcctgatctattaaaagaaatattaagatatataaccgtg
cagcgcatttcagaggtaattcagcgtctgatccaggagcgaatttcagtgcgcaatatg
cggttagttatggaggccttagcattatggagcccacgagagaaagatataatcacactc
gtcgagcatgtacgaggtgcattaggtcgctacatttgccataagttttcatattctgga
gaaattaaagcaattgtgatttcgcctgaaatagaggacagaatcagagatggtgtcagg
cctaccgctggcggtacttttcttaatctcgatgcatccgaagctgagatgattctggat
aattttaaactggcactttctggaatcaatattcctattaaagacattattttactggga
tctgtggatattcgtcgttttatcaaaaaacttattgaatctagttatcgagacctcgaa
gtactttcgtatggggaactaacggaaaatgttcccgttaatattctgaaaactatttag

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