Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_4092
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Entry
ECRM13514_4092 CDS
T03010
Symbol
agaR
Name
(GenBank) Transcriptional repressor of aga operon
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoo03000
]
ECRM13514_4092 (agaR)
Transcription factors [BR:
ecoo03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
ECRM13514_4092 (agaR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
GntR
HTH_5
PK_C
Phage_Mu_Gp48
Motif
Other DBs
NCBI-ProteinID:
AHG10749
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Position
complement(3990243..3991052)
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AA seq
269 aa
AA seq
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MSNTDASGEKRVTGTSERREQIIQRLRQQGSVQVNDLSALYGVSTVTIRNDLAFLEKQGI
AVRAYGGALICDSTTPSVEPSVEDKSALNTAMKRSVAKAAVELIQPGHRVILDSGTTTFE
IARLMRKHTDVIAMTNGMNVANALLEAEGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHF
DMLFLGVDAIDLERGVSTHNEDEARLNRRMCEVAERIIVVTDSSKFNRSSLHKIIDTQRI
DMIIVDEGIPADSLEGLRKAGVEVILVGE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataccgacgcttcaggtgagaagcgagtgacaggcaccagcgagcgacgagaa
cagatcattcagcgtctgcgacagcaagggagtgtgcaggttaacgatctgtcggcattg
tatggcgtatctactgtgacgatccgcaacgatctggcgtttctggaaaagcaggggatc
gctgtgcgtgcctatggtggcgcgttgatctgcgatagcacaacgccgtcagtcgagcca
tcagtggaagataaaagcgcgctgaacaccgcaatgaaacgcagcgttgcgaaagctgcc
gttgagttgattcagccaggtcatcgggtgatcctcgattctgggaccaccacttttgag
attgctcgtctgatgcgcaagcacactgacgtaattgcgatgaccaacggtatgaacgtg
gctaatgcgttgctggaagcggaaggcgttgagctgctgatgaccggcgggcatttgcgc
cgtcagtcgcaatctttttacggcgatcaggctgagcaatcgctgcaaaattaccacttc
gatatgctgtttcttggtgtagatgcgatcgatctggagcgcggcgtcagcacacataat
gaagatgaagcccgtttaaaccgccggatgtgcgaagttgcggaacggatcatcgtggtc
accgattccagtaaattcaatcgttccagtttacataagatcattgatactcaacgtatc
gacatgatcattgttgatgaaggcattcctgcggatagcctggaaggactgcgaaaggct
ggggttgaagtgattctggtcggggagtga
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