Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_4974
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Entry
ECRM13514_4974 CDS
T03010
Symbol
rhaS
Name
(GenBank) L-rhamnose operon regulatory protein RhaS
KO
K02855
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoo03000
]
ECRM13514_4974 (rhaS)
Transcription factors [BR:
ecoo03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ECRM13514_4974 (rhaS)
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
AraC_binding
HTH_AraC
Cupin_2
DUF4924
Motif
Other DBs
NCBI-ProteinID:
AHG11609
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Position
4863165..4864001
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AA seq
278 aa
AA seq
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MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGG
TVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSV
LQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWL
EDHFADEVNWDTVADQFSLSLRTLHRQLKQQTGMTPQRYLNRLRLMKARHLLRHSEASVT
DIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtattacatagtgtggatttttttccgtctggtaacgcgtccgtggcgatagaa
ccccggctcccgcaggcggatttccctgaacatcatcatgattttcatgaaattgtgatt
gtcgaacatggcacgggtattcatgtgtttaatgggcagccctataccatcaccggtggg
acggtctgttttgtgcgcgaccatgatcggcatctgtatgaacataccgataatctgtgt
ctgaccaatgtgctatatcgctcgccggatcgatttcagtttctcgccgggctgaatcag
ttgctgccacaagagctggatgggcagtatccgtctcactggcgcgttaaccacagcgta
ttgcagcaggtgcgacagctggttgcacagatggaacagcaggaaggggaaaatgattta
ccctcgaccgccagtcgcgagatcttgtttatgcaattactgctcttgctgcgtaaaagc
agtttgcaggagaacctggaaaacagcgcatcacgtctcaacttgcttctggcctggctg
gaggaccattttgccgatgaggtgaattgggataccgtggcggatcaattttctctttca
ctgcgtacgctacatcggcagcttaagcagcaaacgggaatgacgcctcagcgttacctg
aaccgcctgcgactgatgaaagcccgacatctgctacgccacagcgaggccagcgttact
gacatcgcctatcgctgtggattcagcgacagtaaccacttttcgacgctttttcgccga
gagtttaactggtcaccgcgtgatattcgtcagggacgggatggttttctgcaataa
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