Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_5140
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Entry
ECRM13514_5140 CDS
T03010
Symbol
iclR
Name
(GenBank) Acetate operon repressor
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoo03000
]
ECRM13514_5140 (iclR)
Transcription factors [BR:
ecoo03000
]
Prokaryotic type
Helix-turn-helix
IclR family
ECRM13514_5140 (iclR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
MarR
HTH_Crp_2
Rrf2
HTH_20
Dimerisation
DUF7343
TrmB
Motif
Other DBs
NCBI-ProteinID:
AHG11763
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Position
complement(5025071..5025895)
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AA seq
274 aa
AA seq
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MVAPIPAKRGRKPAAATAPATGQVQSLTRGLKLLEWIAESNGSVALTELAQQAGLPNSTT
HRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLLAIVHPILRNLMEESGETV
NMAVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASGAGKAFLAQLSEEQVTKLLHR
KGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHALGLRCLAACIFDEHREPFAAISI
SGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcacccattcccgcgaaacgcggcagaaaacccgccgctgccaccgcccccgct
accgggcaagtacagtctttaacgcgtggcctgaaattactggaatggatagccgaatcc
aatggcagtgtggcactcacagagctggcgcaacaagccgggttacccaactccacgacc
caccgcctgctaaccacgatgcaacagcagggtttcgtgcgtcaggtcggcgaactagga
cattgggcaatcggcgcacatgcctttatggtcggcagcagctttctccagagccgtaat
ttgttagcgattgttcaccctatcctgcgcaatctaatggaagaatctggtgaaacggtc
aatatggcggtgcttgatcaaagcgatcacgaagcgattattatcgaccaggtacagtgt
acgcatctgatgcgaatgtccgcgcctatcggcggtaaattgccgatgcacgcttccggt
gcgggtaaagcctttttagcccaactgagcgaagaacaggtgacgaagctgctgcaccgc
aaagggttacatgcctatacccacgcaacgctggtgtctcctgtgcatttaaaagaagat
ctcgcccaaacgcgcaaacggggttattcatttgacgatgaggaacatgcactggggcta
cgttgccttgcagcgtgtattttcgatgagcaccgtgaaccgtttgccgcaatttctatt
tccggaccgatttcacgtattaccgatgaccgcgtgaccgagtttggcgcgatggtgatt
aaagcggcgaaggaagtgacgctggcgtacggtggaatgcgctga
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