Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_5269
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Entry
ECRM13514_5269 CDS
T03010
Symbol
soxS
Name
(GenBank) Regulatory protein SoxS
KO
K13631
AraC family transcriptional regulator, mar-sox-rob regulon activator
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoo03000
]
ECRM13514_5269 (soxS)
Transcription factors [BR:
ecoo03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ECRM13514_5269 (soxS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AHG11889
LinkDB
All DBs
Position
complement(5135482..5135805)
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AA seq
107 aa
AA seq
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MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL
LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatcagaaaattattcaggatcttatcgcatggattgacgagcatattgaccag
ccgcttaacattgatgttgtcgcaaaaaaatcaggctattcaaagtggtacttgcaacgg
atgttccgcacggtgacgcatcagacgcttggcgattacattcgccaacgccgcctgtta
ctggccgccgttgagttgcgcaccaccgagcgtccgatttttgatatcgcaatggacctg
ggttatgtctcgcagcagaccttctcccgcgttttccgtcggcagtttgatcgcactccc
agcgattatcgccaccgcctgtag
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