Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_5420
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Entry
ECRM13514_5420 CDS
T03010
Symbol
frdA
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Pathway
ecoo00020
Citrate cycle (TCA cycle)
ecoo00190
Oxidative phosphorylation
ecoo00620
Pyruvate metabolism
ecoo00650
Butanoate metabolism
ecoo00720
Other carbon fixation pathways
ecoo01100
Metabolic pathways
ecoo01110
Biosynthesis of secondary metabolites
ecoo01120
Microbial metabolism in diverse environments
ecoo01200
Carbon metabolism
ecoo02020
Two-component system
Module
ecoo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ecoo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ecoo_M00150
Fumarate reductase, prokaryotes
ecoo_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
ECRM13514_5420 (frdA)
00620 Pyruvate metabolism
ECRM13514_5420 (frdA)
00650 Butanoate metabolism
ECRM13514_5420 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
ECRM13514_5420 (frdA)
00720 Other carbon fixation pathways
ECRM13514_5420 (frdA)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECRM13514_5420 (frdA)
Enzymes [BR:
ecoo01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
ECRM13514_5420 (frdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
Thi4
FAD_oxidored
GIDA
FabD_helical_ins
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AHG12039
LinkDB
All DBs
Position
complement(5287561..5289369)
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AA seq
602 aa
AA seq
DB search
MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDH
DSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGM
KIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGT
LVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTGLPGS
GILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWR
KGNTISTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMG
GIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAATAGN
GNEAAIEAQAAGVEQRLKDLVNQDGGENWAKIRDEMGLAMEEGCGIYRTPELMQKTIDKL
AELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSAMARKESRGAHQRLDEGC
TERDDVNFLKHTLAFRDADGTTRLEYSDVKITTLPPAKRVYGGEADAADKAEAANKKEKA
NG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaacctttcaagccgatcttgccattgtaggcgccggtggcgcgggattacgtgct
gcaattgctgccgcgcaggcaaatccgaatgcaaaaatcgcactaatctcaaaagtatac
ccgatgcgtagccataccgttgctgcagaagggggctccgccgctgtcgcgcaggatcat
gacagcttcgaatatcactttcacgatacagtagcgggtggcgactggttgtgtgagcag
gatgtcgtggattatttcgtccaccactgcccaaccgaaatgacccaactggaactgtgg
ggatgcccatggagccgtcgcccggatggtagcgtcaacgtacgtcgcttcggcggcatg
aaaatcgagcgtacctggttcgccgccgataagaccggcttccatatgctgcacacgctg
ttccagacctctctgcaattcccgcagatccagcgttttgacgaacatttcgtactggat
attctggttgatgatggtcatgttcgcggcctggtagcaatgaacatgatggaaggcacg
ctggtgcagatccgtgctaacgcggtcgttatggctactggcggtgcgggtcgcgtttat
cgttacaacaccaacggcggcatcgttaccggtgacggtatgggtatggcgctaagccac
ggcgttccgctgcgtgacatggaattcgttcagtatcacccaaccggtctgccaggttcc
ggtatcctgatgaccgaaggctgccgcggtgaaggcggtattctggtcaacaaaaatggc
taccgttatctgcaagattacggcatgggcccggaaactccgctgggcgagccgaaaaac
aaatatatggaactgggtccacgcgacaaagtttctcaggccttctggcacgaatggcgt
aaaggcaacaccatctccacgccacgtggtgatgtggtttatctcgacctgcgtcacctc
ggcgagaaaaaactgcatgaacgtctgccgttcatctgcgaactggcgaaagcgtacgtt
ggcgtcgatccggttaaagaaccgattccggtacgtccgaccgcacactacaccatgggc
ggtatcgaaaccgatcagaactgtgaaacccgcattaaaggtctgttcgccgtgggtgaa
tgttcctctgttggtctgcacggtgcaaaccgtctgggctccaactccctggcggaactg
gtggtcttcggtcgtctggccggtgaacaagcgacagagcgtgcagcaactgccggtaat
ggcaacgaagcggcaattgaagcgcaggcagctggcgttgaacaacgtctgaaagatctg
gttaaccaggatggcggcgaaaactgggcgaagatccgcgacgaaatgggcctggctatg
gaagaaggctgcggtatttaccgtacgccggaactgatgcagaaaaccatcgacaagctg
gcagagcttcaggaacgcttcaagcgcgtgcgcatcaccgacacttccagcgtgttcaac
accgacctgctctacaccattgaactgggccatggtctgaacgttgctgaatgtatggcg
cactccgcaatggcacgtaaagagtcccgcggcgcacaccagcgtctggacgaaggttgc
accgagcgtgacgacgtcaacttcctcaaacacaccctcgccttccgcgatgctgatggc
acgactcgcctggagtacagcgacgtgaagattactacgctgccgccagctaaacgcgtt
tacggtggcgaagcggatgcagccgataaggcggaagcagccaataagaaggagaaggcg
aatggctga
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