Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_5477
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Entry
ECRM13514_5477 CDS
T03010
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Pathway
ecoo00230
Purine metabolism
ecoo00240
Pyrimidine metabolism
ecoo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
ECRM13514_5477 (cpdB)
00240 Pyrimidine metabolism
ECRM13514_5477 (cpdB)
Enzymes [BR:
ecoo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
ECRM13514_5477 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
ECRM13514_5477 (cpdB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
DUF7436
Motif
Other DBs
NCBI-ProteinID:
AHG12093
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All DBs
Position
complement(5342972..5344915)
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AA seq
647 aa
AA seq
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MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLIN
DARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDIHPVYKALNTLDYTVGTLGNHEFN
YGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDTEVVDKDGKKQTLKIGYIGVV
PPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGADVVVVLAHSGLSADPYKVMAENS
VYYLSEIPGVNAIMFGHAHAVFPGKDFADIEGADIAKGTLNGVPAVMPGMWGDHLGVVDL
QLSNDSGKWQVTQAKAEARPIYDIANKKSLAAEDSKLVETLKADHDATRQFVSKPIGKSA
DNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQGDPDLAKLPVLSAAAPFKVGGRKNDPAS
YVEVEKGQLTFRNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSLIN
WDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMINANAERIKNLTFNGKPIDPNAMFLVA
TNNYRAYGGKFAGTGDSHIAFASPDENRSVLAAWIADESKRAGEIHPAADNNWRLAPIAA
DKKLDIRFETSPSDKAAAFIKEKGQYPMNKVATDDIGFAIYQVDLSK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtttagcgcaacgctcctggccacgctgattgccgccagtgtgaatgcagcg
acggtcgatctgcgtatcatggaaaccactgatctgcatagcaacatgatggatttcgat
tattacaaagacaccgccacggaaaaattcggactggtacgtacggcaagcctgattaac
gatgcccgcaatgaagtgaaaaacagcgtactggttgataacggcgacttgattcagggg
agtccgctggcagattacatgtcggcgaaaggattaaaagcaggcgatattcacccggtc
tataaggcattaaatacgctggactataccgtcggaacgcttggcaaccacgagtttaac
tacggtctggattacctgaaaaatgcgctggcaggagcgaaattcccttatgtaaatgcc
aacgtcattgacgccagaaccaaacagccaatgtttacaccgtatttaattaaagacacc
gaagtggtcgataaagacggaaaaaaacagacgctgaagattggctatattggcgtcgtg
ccaccacaaatcatgggctgggataaagctaatttatccggaaaagtgacggtgaatgat
attaccgaaaccgtgcgcaaatacgtgcctgaaatgcgcgagaaaggtgccgatgttgtt
gtcgttctggcacattccgggctgtctgccgatccgtataaagtgatggcggaaaactca
gtttattacctcagtgaaattccgggcgttaacgccattatgtttggccatgctcacgcc
gttttcccaggtaaagattttgctgatatcgaaggggctgatatcgccaaaggcacgctg
aatggtgttccggcggtaatgccaggcatgtggggcgatcatcttggtgtggtcgactta
caactcagtaatgacagcggtaaatggcaggtgacgcaagcgaaagcggaagcacgaccg
atttacgacatcgctaataaaaaatccctcgcggcggaagacagcaagctggtagaaaca
ctcaaagccgatcacgatgccacacgccagttcgtcagcaagccaatcggtaaatctgcc
gacaatatgtatagctatctggcgctggtgcaggacgatccgaccgtgcaggtggtgaac
aacgcgcaaaaagcgtatgtcgagcattacattcagggcgatccggatctggcaaaactg
ccggtgctttcagctgccgcaccgtttaaagttggtggtcgcaaaaatgacccggcaagc
tatgtagaggtggaaaaaggtcagctgactttccgtaatgccgccgatctttatctctat
cccaatacgctgattgtggtgaaagccagcggtaaagaggtgaaagagtggctggagtgc
tccgccggacagtttaaccagattgatcccaacagcacgaaaccacagtcactcatcaac
tgggacggtttccgcacctataactttgatgttattgatggtgtgaattatcagattgat
gttacccagcccgcccgttatgacggcgagtgccagatgattaatgccaatgcggaaagg
attaagaacctgacctttaatggcaagccgattgatccgaacgctatgttcctcgttgcc
accaataactatcgcgcttacggcggcaaatttgccggtacgggcgacagccatatcgct
tttgcttcaccggatgagaaccgctcggtgctggcagcgtggattgctgatgagtcgaaa
cgtgcgggggaaattcacccggcggcagataacaactggcgtttagcaccgatagctgcc
gataagaaactggatatccgtttcgaaacttccccgtcagataaagccgcagcgtttatt
aaagagaaagggcaatatccgatgaataaagtcgcgaccgatgatatcgggtttgcgatt
tatcaggtggatttgagtaagtaa
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