Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_5549
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Entry
ECRM13514_5549 CDS
T03010
Name
(GenBank) Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
ECRM13514_5549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
ResIII
KIF21A
DUF1319
Anti-TRAP
HypA
Motif
Other DBs
NCBI-ProteinID:
AHG12164
LinkDB
All DBs
Position
5427641..5433982
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AA seq
2113 aa
AA seq
DB search
MLPSVVSRQVADSVAAFLRAAFPLNSPLFNGENNDNVSMLEQFLAQPETLLKGPYLSAQL
PFRKSDLPLNFFPNLTLPFPPHAHQARAFQRLGSDAPQPTLVATGTGSGKTECFMFPLLN
HCAGASHAGVKAIIIYPMNALATDQASRFAKTIASDPQLHGKVTVGLFVGDSEIEPSKKM
SAEKVITCKHTLRESPPDILLTNYKMLDYLLMRPGDQPLWRYNQPGSLRYLVVDELHTFD
GAQGSDLACLVRRLKHHIGVDNQRFACVGTSATVGDELGQLLDYAKTIFDQPFTDDAVIR
EDRYTAAEYLQDYAIAYSQYPGPEAASALDPQSYSTPVAYLNGQIPLWFPDSDLQLPDDL
ESDDGREKRIALGSLLRRHSVMHVLLHDLQGGILSERECLENLQVMLAESADHARRVLQS
ILALIAQARLEVPETEHDRQKRLQAKKARPVLPFVQLRSQLWLREMRRLVASVAKTPRLV
FADDVAVEDREHYLPVIHCRDCHATGWASLRHGQSVQLETDLDGIYRQFFEKGRSIVLAF
PDNNEKAVSGAHQKLCPTCLKLNRQSSVQCGHCGHTELLQVLIPDMLKERKDELEFANEC
PYCNSKQGISILGSRAASLSAVMIHQLYGSQFNEHKKLITFSDSVQDAAHRASFFTARTW
PLMIRGQIASVLGEKETLPLDAFAARVCQQTRERSPDDAHFAANFIAPNMQWLNDYQTLK
NEGKLAENSDLPELVSLRLDWEVYSEFTLRARIGRTLEATGYAVAGVDKDRFNPAITALH
QQLCEELGDEMSGVSVEQVAHLALGVIWYQRQAGAVMHPAFESYRRDGTTFMMTQKERTS
RYMPSIGPKTRKPAYASFEKINGFHRLIGAKSNPSWYQHWINRTLSNGNNLFISSVAETV
LRRLFTALKIAGVVKDFDTKGREAWGLVPSALVVSRDVVQLNCSCCREVVRAPADQGWQW
RNAPCLSLRCEGRYLEVDNMATWRWENMDIARVQGAEHTGLLSREDREATEKSFYRGNQP
WNINLLSATPTLEMGIDVGDLSTVLLCSVPPAQANYLQRIGRAGRKDGNALNITVAEGNP
HDQFFFEEPLEMMQGQVQAPGVFLNATAILERQLAAFCMDNWVKTGVPESAICKNVKQML
DELEFGRKSGFPYNLLRYIEQHHAEIAAQFTAIFPDLAAETRQQLLSYLQGAPGQRSLVQ
RIEEALKLLVEDRKSLRSRIDKLKRSIDKLENAPRDQNFDSDMRELTSERQALMALVNQI
NNKQTLNFLTDEGLLPNYAFPEAGITLRSVLWRRKEGGEAREYQNTTFEYERPASTALAE
LAPLNNFYAGGHKVEIEQIDLKVSEPENWRICSHCNYSENIDQTGDQHKYCPKCGTPGWA
DAGQKTTLLKLRQVYARASARDSQISDESDSREPAFFQRQLLVSFEKEDVSAAYAIEEGE
VPFGFEFLSKVTLRDINFGKMADDANELMIAGEAKKRTGFKVCLGCGMVQRPRDHEPRHD
LSCKYRTEPEKAKFEDYLYLYRQLESEALRILLPVSSYSNDRVVEASLGAAIQLGLKHYF
KGNVDHLKGVVYREPENEGEFWRQYLVIYDTVPGGTGSLKELMRTPDNLLKLLELAYQAI
VECSCNNDTHKDGCYRCVYAYRDRGRMKYVSRDQARLLLAKILQARDSIRVIDSIKNISL
EAMMGSELEKRFISCLQENKNLIVSRSYAHQGAGWIINTRSEPMMSWHLKAQVDLGAKEA
VGIPCRPDYVLYPLMQSDAIKPVVIFLDGFAFHKNSVAEDVQKRQAIRDSGNFWVWTVTW
ADLKEPGLKHVQDVLGLGHNPDMKQPKFYNLFHDTNFAALEASFRERNSFALLLDYLADP
GGRTQLWQRMAAAHAWVWLDVKKSQDAGTKQKYAYEMQENAPAWRLAELLPDEPFVFGGL
LDSCNSSQQFIELASVLPQQAIKPTTSVAQMRSWLRLHICFDDRYTQDDGYEAGLNGFWR
LVNLLQFLPDMTFTSRKAVHLPQESVDTKVSATPEAVPETDESWAEIIEFGLLSAEEIAL
LQSHSLSAPTLGYELQNDEGEIIAEADLAWPSQKWALIIDNQEFIPLFTTRGWHVAFGPI
DENTLQHLSGGDK
NT seq
6342 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgtccgttgtcagtcggcaggtcgccgacagcgttgccgcctttttacgggcg
gcgttcccgctaaacagcccgctgtttaacggtgagaataacgataatgtctcaatgctg
gagcaatttctggcccagcccgaaacgctgctgaaaggaccatacctttccgcccagttg
ccgtttcgtaaaagtgacttaccactgaatttcttccctaatctgacgctgccgttcccg
ccgcacgcgcatcaggcccgggcatttcagcgtctgggaagcgacgcgccacagccgaca
ctggtcgctaccggtaccggctccggtaaaacagaatgctttatgttcccgctgctcaac
cactgcgcgggcgcgtcacatgccggggttaaagcgattatcatctacccgatgaacgcc
ctggcaaccgatcaggccagccgtttcgccaaaaccatcgccagcgatccacaactgcat
ggcaaggtgaccgtcggcttgtttgtcggcgacagcgaaatcgaacccagcaagaaaatg
tcggcagaaaaggtcattacctgcaagcacacgctgcgcgaaagcccgccggacatcctg
ttgaccaactacaaaatgctcgactacctgctgatgcgccctggcgatcagccgctctgg
cgttacaaccagcccggttcattgcgttacctggtcgtggatgaattgcatacgtttgat
ggcgcgcaagggtcggatctggcctgtctggtgcgacgtctgaagcatcacataggtgtg
gataaccaacgattcgcctgcgtcgggacatcagctaccgtcggcgacgaactggggcaa
ctgctcgattacgcaaaaacaatctttgaccagccgtttaccgatgacgccgttattcgc
gaagatcgctacacggcagcggagtacttgcaggattatgccattgcgtacagtcagtat
ccggggccggaggccgcttcggccctggacccgcagagttactctaccccggtagcgtat
ctcaacgggcaaatccctttgtggttccccgacagcgatttgcaactcccggacgatctg
gagagcgacgacgggcgtgaaaagcgtattgcgctggggtcactgttacgccgccacagc
gtgatgcatgtcttactccatgatctgcaaggcgggatcctctctgagcgagagtgtctg
gaaaatctccaggtcatgctggcagaaagcgccgaccatgcccgacgcgtgctgcaaagc
attctggcgctgatcgcgcaggcacgtctcgaagtaccggaaacggaacacgatcgtcaa
aaacgtctccaggcgaagaaagcgcgtccggtgctgccgtttgtgcaactgcgctcccag
ttgtggcttcgtgagatgcgtcgtctggtcgccagcgtggcgaaaacgccgcgactggtg
tttgccgatgatgtggcggtggaagaccgcgaacactatttgccggttatccactgccgt
gactgccatgcaaccggctgggccagcctgcgtcatgggcaaagcgttcagctggaaaca
gacctcgacggcatttatcgccagttctttgaaaaagggcgctccatcgtcctcgctttc
ccggataataacgaaaaagcggtcagtggcgcacaccagaaactgtgtcctacctgtctg
aaacttaaccgacagtccagcgtccagtgtggacattgcggtcatacggaactgttgcag
gtactgatcccggatatgctcaaagagcgtaaggacgagctggagtttgctaatgaatgc
ccgtactgcaacagcaaacaggggatttcgatcctggggtcacgggctgccagtctgtcg
gcggtgatgattcaccagctttatggcagccagttcaacgaacataaaaagctgattacg
ttttctgactcggtacaagacgccgcgcatcgtgccagcttctttactgcccgaacctgg
ccgctgatgattcgtgggcaaatcgccagtgttcttggcgaaaaagagacattaccgctg
gatgcgttcgcggcgcgtgtttgccaacaaacgcgtgaacgttcaccggacgatgctcat
tttgcagcgaacttcatcgcaccaaatatgcagtggctgaatgattatcagacgctgaaa
aatgaaggcaaactggcggagaactccgatctgccggagctggtttccctgcgcctcgac
tgggaggtgtacagcgaatttaccctgcgcgcgcgtatcggacgtacgctggaagccacc
ggttatgccgttgccggagtggataaagatcgctttaatccggcaattaccgccctgcat
caacagctttgtgaagagctgggtgatgagatgtccggtgtgagcgtcgagcaggtagcg
cacctggcgctgggggttatctggtatcaacgccaggccggggccgttatgcatccggcg
ttcgaaagttatcgccgtgatggcacgacctttatgatgacgcaaaaagagcgtacatcg
cgctatatgccttctatcggtccgaaaacgcgtaaaccggcttatgcgtcgtttgaaaaa
attaatggtttccatcgcctgattggcgcgaagtctaaccccagttggtatcagcattgg
atcaatcgcacgctgagtaacggcaataatctgtttatcagtagcgttgcggaaacagtg
ttacgacgcctgtttacggcgttgaaaatagccggagtagtaaaagattttgacaccaaa
gggcgtgaagcctggggactggtgccttcggcgctggtggtgagccgtgacgtcgttcag
cttaattgctcatgttgccgtgaggttgtccgggctccggccgatcaaggctggcagtgg
cgtaatgcgccttgtctctctttacgttgtgaaggtcgttacctagaagtcgacaatatg
gcgacctggcgttgggagaacatggacatcgcgcgcgtgcagggcgcagaacacacgggg
ctgcttagccgtgaagatcgcgaagccaccgaaaaatcgttctaccgcggcaaccaaccg
tggaatatcaacctgttgtcggcaacaccgacgctggagatgggtattgacgttggggat
ctttccaccgttttactctgttctgtcccacctgctcaggccaactacttgcaacgtatt
ggtcgcgccggtcgtaaagatggtaacgcgttaaacattaccgtggcagaagggaacccg
cacgatcagtttttctttgaagaaccactggagatgatgcagggccaggtgcaggctcct
ggcgtcttcctcaatgcaacggctattctcgaacgccagctggcagctttttgtatggat
aactgggtgaaaaccggtgtaccagaatccgctatctgtaaaaacgtcaaacagatgctg
gatgagctggagttcgggcgtaaatcgggttttccgtataacttactgcgatatatcgag
cagcatcatgcggagattgctgcgcaatttacggcaatcttccccgatcttgccgcagaa
actcgccaacagctgttgtcttatcttcagggcgcgccaggacaacgctcgctggtgcag
cgtatcgaagaagcgttaaaactgctggtggaagatcgcaaatctttgcgctcacgcatc
gataaactcaagcgcagtatcgataaactggagaacgcgccgcgcgatcaaaactttgat
agcgatatgcgcgagttaacttcggaacggcaggcgctgatggcgctggtcaatcaaatc
aacaataagcaaacgctgaatttcctcacggatgaaggtctgctgcctaactacgccttc
ccggaagccggtattacgttacgttctgtgctctggcggcgtaaagaaggcggggaagca
cgtgaatatcaaaacaccactttcgaatatgaacgcccggcatcaacggcgctggctgag
ctggctccgctgaataatttctatgccggtgggcataaagttgaaattgagcagatagac
ctgaaggtctctgagccggagaactggcgtatctgtagccactgtaactacagcgaaaat
atcgaccagacgggcgaccagcataaatattgcccgaaatgtggcacaccggggtgggcc
gatgccggacaaaaaaccacgctgctgaaacttcgccaggtttatgcccgcgccagcgca
cgtgatagccagatcagcgacgagagcgacagccgtgaacctgctttcttccagcgtcag
ctattggttagtttcgaaaaagaagatgtatcggcggcatacgcgattgaggaaggcgaa
gttccgtttggttttgaatttttaagcaaagtcaccctgcgggatatcaacttcggcaaa
atggcggatgatgccaatgagttgatgattgccggagaagcgaagaagcgaaccgggttt
aaagtttgcctcgggtgcggcatggtgcagcgtcctcgcgatcatgaaccacgtcatgat
ttgagctgcaaatatcgcacggaaccggaaaaggcgaagttcgaagattatctctacctc
tatcgccagctggagtcagaagcgttgcgtattctgctcccggtaagcagttacagtaat
gaccgtgtcgtggaggcttctcttggggcggcgatccagctcggtcttaaacattacttc
aaggggaatgtcgatcacctgaaaggcgttgtgtaccgcgagccggaaaatgaaggcgaa
ttctggcggcagtatctggtgatttacgataccgtcccgggggggactggttctcttaaa
gaactgatgcgcactcccgacaatttgctgaaattacttgaactggcctatcaggcaata
gtggaatgcagttgcaacaatgatacgcataaagatggttgttatcgttgcgtttacgct
taccgtgaccgtgggcgcatgaagtatgtctcccgcgatcaggcgcgtctcttgctggcg
aaaattttgcaggcaagagattcgatacgggtaattgattccatcaaaaacatttccctc
gaagccatgatgggcagtgagctggaaaaacggtttattagctgcctgcaagaaaataaa
aacctgattgtcagtcgcagttacgcgcatcagggcgctgggtggattattaacacccgc
agcgaaccgatgatgagctggcatcttaaagctcaggtggatttaggcgctaaagaggcg
gtggggatcccttgtcgcccggattacgtgctatatccgcttatgcagtctgatgccatt
aaaccggtggttattttccttgatggctttgcgttccacaaaaatagcgtcgcagaggat
gtgcaaaaacgccaggcgattcgggatagcggtaatttctgggtgtggacagtcacgtgg
gccgatctcaaagagcctgggcttaaacatgttcaggatgtcctgggacttgggcataac
ccggatatgaaacagcctaagttttataacctgtttcatgataccaactttgcggccctt
gaagcgtcgttccgggaacgcaacagttttgcactgctgctggattatctcgccgatccg
ggcggaagaacgcagttatggcagagaatggctgctgcacatgcctgggtgtggttggat
gtgaagaagtcacaggacgcgggaacgaaacaaaagtatgcctatgaaatgcaggaaaac
gcgccagcctggcggctagcagagcttttgccagacgaaccgtttgtctttggtggttta
ctcgatagctgtaactcatcgcagcaatttattgagctggcttcggtgttgccacaacaa
gccattaaaccgacgaccagcgtcgcacaaatgcgcagctggctgcgtttgcatatctgt
tttgacgatcgctatacgcaggatgacggttatgaagcgggactcaatggcttctggcga
ctggtaaacctgttacagttcctgccggatatgacctttaccagccgtaaagccgtgcat
ttaccgcaggaaagcgttgacactaaagtttcggcaacgccagaggcagtaccagagact
gatgagagttgggctgagattattgagtttggcttattaagcgctgaagagatcgcgttg
cttcagtctcattctctctctgcgccgactctcggctacgaattgcaaaatgatgaaggt
gaaattattgcggaagccgatctcgcctggccatcacaaaaatgggcattgattattgat
aatcaagaatttattccattattcacaaccaggggttggcacgttgcattcgggccaatt
gacgaaaatacattgcaacatctgtccggaggtgacaaatga
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