KEGG   Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_5806
Entry
ECRM13514_5806    CDS       T03010                                 
Symbol
traF
Name
(GenBank) IncF plasmid conjugative transfer pilus assembly protein TraF
  KO
K12057  conjugal transfer pilus assembly protein TraF
Organism
ecoo  Escherichia coli O145:H28 RM13514 (EHEC)
Brite
KEGG Orthology (KO) [BR:ecoo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ecoo02044]
    ECRM13514_5806 (traF)
Secretion system [BR:ecoo02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   ECRM13514_5806 (traF)
SSDB
Motif
Pfam: TraF
Other DBs
NCBI-ProteinID: AHG12420
LinkDB
Position
pRM13514:complement(11826..12695)
AA seq 289 aa
MIWQPEFTDKTLSRKTGAVQPKPAAPLPSGPEMFSAEWFRENLPKYKDLAWNNPTVENVR
TFLYLQRFAIDRSEQFSDATELAVVGDPFLDEITRRPAATFASQQVDRDAGNAKNMLLKS
VAERVGIFFFYKSDDDYSDLQAPLIKMLEQGEGFSIIPVSMDGKPLPSGLFPHYKTDEGH
AKQLGIVTFPAVYLASPDGQFAPIGQGPMSLPELNHRILVAAKRNGWVTDEEFNRTRPVL
NLENNIAERLASPELGSDLKQLSQASGDKDNFVPPEQLMKYIRDKLQEN
NT seq 870 nt   +upstreamnt  +downstreamnt
atgatctggcagcctgagttcacagataaaacactctccaggaaaaccggggcggttcag
cctaagcctgctgctccgcttccgagcggcccagaaatgttctcagcggaatggttccgg
gaaaacttacccaagtacaaagaccttgcttggaacaatcctaccgttgaaaacgtcagg
acgtttctctacttgcaacgatttgcgatagatcgctctgaacaattttccgatgctaca
gagctggcggtcgtaggtgatcctttcttggatgaaattactcgacgtcctgctgccacg
tttgcctcacaacaagttgatcgtgacgctggtaacgccaaaaacatgctactcaaaagc
gtagccgaacgcgtagggatattcttcttctacaagtccgacgatgactacagtgacttg
caagcaccgctcatcaagatgttggaacaaggagaaggattctcgatcattcctgtatct
atggacggcaaaccactccccagtgggcttttcccccattacaaaaccgatgaaggccat
gccaaacaacttggtatcgtaactttccctgctgtttacctcgcatctccagacggtcag
ttcgctcctataggacaagggccaatgtctcttcctgagctgaatcacaggattttggtc
gcagcaaaacgcaatggttgggtcacagacgaagagtttaaccgtacacgtccggtactc
aacctggaaaacaacatagccgaacgcttggcctcaccagagctgggctctgacctcaaa
cagctatctcaagcgagcggtgataaagacaactttgtgccaccggaacaactcatgaag
tacatccgggacaaattacaggagaactaa

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