Ectopseudomonas composti: L0Y47_03935
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Entry
L0Y47_03935 CDS
T11864
Symbol
fis
Name
(GenBank) DNA-binding transcriptional regulator Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
ecop Ectopseudomonas composti
Brite
KEGG Orthology (KO) [BR:
ecop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecop03000
]
L0Y47_03935 (fis)
03036 Chromosome and associated proteins [BR:
ecop03036
]
L0Y47_03935 (fis)
03400 DNA repair and recombination proteins [BR:
ecop03400
]
L0Y47_03935 (fis)
Transcription factors [BR:
ecop03000
]
Prokaryotic type
Helix-turn-helix
Other families
L0Y47_03935 (fis)
Chromosome and associated proteins [BR:
ecop03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
L0Y47_03935 (fis)
DNA repair and recombination proteins [BR:
ecop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
L0Y47_03935 (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
YCH83322
LinkDB
All DBs
Position
complement(926530..926850)
Genome browser
AA seq
106 aa
AA seq
DB search
MTLMTETLVSGIAPVSDNTSLKQHLNTPSEEGQTLRGAVEKALHNYFAHLEGADVTDVYN
LVLTEVEAPLLETVMNHVKGNQTKASELLGLNRGTLRKKLKQYDLL
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgatgacagagaccctagtgagtggaattgcacccgtgagtgacaacaccagc
cttaaacagcacctgaacacgccgagcgaagagggccagaccctgcgcggcgccgtggag
aaggcgctgcacaattacttcgcccacctcgaaggcgcggacgtcaccgacgtgtacaac
ctggtgctcaccgaagtcgaagcgccgctgctggaaaccgtcatgaatcacgtgaaaggt
aaccagaccaaggcttccgaactgctcggcctgaaccgtggcacgctgcgcaagaagctc
aagcaatacgatctgctgtaa
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