Ectopseudomonas composti: L0Y47_10205
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Entry
L0Y47_10205 CDS
T11864
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ecop Ectopseudomonas composti
Pathway
ecop03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L0Y47_10205 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecop03400
]
L0Y47_10205 (uvrB)
DNA repair and recombination proteins [BR:
ecop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L0Y47_10205 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L0Y47_10205 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
YCH84501
LinkDB
All DBs
Position
2263073..2265088
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AA seq
671 aa
AA seq
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MSEFQLVTRFKPAGDQPEAIRQMVEGLEAGLSHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALIERKDVIVVCTVSSIYGLGSPEEYLKMVLHLDRGDKMDQRALLRRLAELQY
TRNDMDFARATFRVRGDVIDVFPAESDLEAIRVELFDDEVESISAFDPLTGEVIQKLPRF
TFYPKSHYVTPRETLLEAVEHIKVELQQRLEYLRGANKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPSGAPPPTLYDYLPDEALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFEEWEAASPQTIFVSATPGPYEGEHAGRVVEQLVRPTGLVDPQ
IEVRPARTQVDDLLSEIRLRVASGDRVLVTTLTKRMAEDLTDYLGDHDVKVRYLHSDIDT
VERVEIIRDLRLGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADNMTGSMQRAIGETERRRAKQVAFNEANGIVPKGVQKDVKDILEGAVV
PGARSNKRKGMAKAAEESARYENELRSPSEITKRIRQLEEKMYALARDLEFEAAAQLRDE
IQKLRDRLLQV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtttcagttggtgacccgcttcaaacctgccggcgatcagcctgaggcgatc
cggcagatggtcgaggggctggaggctgggctttcgcaccagacattgctcggcgtgact
ggctcaggcaagactttttccatcgccaacgtgattgcccaggtgcagcgcccgacgctg
gtgttggcgccgaacaagaccctggccgcgcagctttacggcgagttcaaggcgttcttc
ccgaacaacgcggtggagtacttcgtctcctactacgactactaccagcccgaagcctac
gtgccgtcgtccgacaccttcatcgagaaggatgcctcgatcaacgaccatatcgagcag
atgcgcctgtcggcgaccaaggcgctgatcgagcgtaaggacgtgatcgtggtctgcacg
gtttcttcgatctacggcttgggcagtcccgaggagtacctgaaaatggtgctgcacctc
gaccgtggcgacaagatggatcagcgtgcgttgctgcgccgcctggccgagttgcagtac
acgcgcaacgacatggattttgcccgcgcgacgtttcgtgtgcgtggcgatgtgatcgac
gtttttccggcggagtcggatctggaagccattcgcgtcgagctgttcgacgacgaagtg
gagagtatcagcgccttcgatccgctcaccggcgaggtgatccagaagctgccacgcttc
actttctaccccaagagccactacgtcacgccgcgtgagacgctgctggaggcggtggag
cacatcaaggtcgagctgcagcagcgcctggagtacctgcgtggcgcgaacaagctggtt
gaggcgcagcgtctggagcagcgtacgcgcttcgatctggaaatgatcctcgagctgggt
tattgcaacggtatcgagaactactcgcgctatctctcggggcgcccatctggtgcgccg
ccgcccacgctttacgactacctgccggacgaggcgctgctggttatcgacgagtcccac
gtctcggtgccgcaggtcggtgccatgtacaagggcgaccgttcacgcaaggaaacgctg
gtggaatacggcttccgcctgccgtcggcgttggataaccgaccgatgcgcttcgaagag
tgggaggcggccagtccgcagaccattttcgtctctgctacgcccgggccttacgagggt
gaacatgccgggcgcgtggtggagcagttggtgcgaccgaccggcttggtcgacccgcag
atcgaggtgcgcccggcgcgcactcaggtcgatgacctgctctcggaaatccgcttgcgc
gtggcgtcgggagatcgcgtgttggtcaccacgctgaccaagcgcatggccgaggacttg
accgattatctgggtgaccatgacgtcaaggtgcgttacctgcactccgacatcgatacc
gtggagcgggtagagatcattcgcgacctgcgcctgggcgctttcgacgtgctggtgggc
atcaacctgttgcgtgaggggctggacatgcccgaggtgtcgctggtggcgatcctcgat
gcggataaggaaggcttcctgcgcagcgagcgctcgttgattcagaccattggtcgggca
gcacgtaacctcaacggcagggcgattctctacgccgacaacatgaccggatcgatgcag
cgcgccatcggtgagaccgagcggcgccgcgccaagcaggtcgcgttcaacgaggccaat
ggcatcgtacccaagggcgtgcagaaggacgtcaaggacattctcgaaggtgccgtggtg
ccgggggcgcgcagcaacaagcgcaagggtatggccaaggcagcggaggagagcgctcgc
tacgagaacgaactgcgttcgccgagcgagatcaccaagcgtattcgtcagctggaagag
aagatgtacgccctggcgcgcgacctggagttcgaggccgcggcgcagttgcgtgatgag
attcagaagctgagggatcggttgttgcaggtttga
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