Eikenella corrodens: SAMEA4412678_0090
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Entry
SAMEA4412678_0090 CDS
T05039
Symbol
fis
Name
(GenBank) Hin recombinational enhancer-binding protein
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
ecor
Eikenella corrodens
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecor03000
]
SAMEA4412678_0090 (fis)
03036 Chromosome and associated proteins [BR:
ecor03036
]
SAMEA4412678_0090 (fis)
03400 DNA repair and recombination proteins [BR:
ecor03400
]
SAMEA4412678_0090 (fis)
Transcription factors [BR:
ecor03000
]
Prokaryotic type
Helix-turn-helix
Other families
SAMEA4412678_0090 (fis)
Chromosome and associated proteins [BR:
ecor03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SAMEA4412678_0090 (fis)
DNA repair and recombination proteins [BR:
ecor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SAMEA4412678_0090 (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
HTH_30
Fis_N
Phage_NinH
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
SNW06107
LinkDB
All DBs
Position
1:90580..90819
Genome browser
AA seq
79 aa
AA seq
DB search
MLHQNSHITTCIENSLQQYFTDLDGQPAHDVYQMVLQQVELPLLRYVMAHCEGNQSKAAQ
VLGLNRNTLRKKLSAYGLI
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgctccatcagaacagccatatcactacttgcatcgaaaacagcctgcagcaatacttt
accgatctcgacggccaaccggcgcacgacgtgtatcaaatggtgttgcagcaagtagaa
ctgccgcttttgcgctacgtgatggcgcattgcgaaggcaaccaatccaaagccgcccaa
gtgctcggcctaaaccgaaataccctgcgcaagaagctcagcgcctacggcttgatttag
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