Eikenella corrodens: SAMEA4412678_0385
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Entry
SAMEA4412678_0385 CDS
T05039
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ecor
Eikenella corrodens
Pathway
ecor03030
DNA replication
ecor03430
Mismatch repair
ecor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA4412678_0385 (dnaX)
03430 Mismatch repair
SAMEA4412678_0385 (dnaX)
03440 Homologous recombination
SAMEA4412678_0385 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecor03032
]
SAMEA4412678_0385 (dnaX)
03400 DNA repair and recombination proteins [BR:
ecor03400
]
SAMEA4412678_0385 (dnaX)
Enzymes [BR:
ecor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA4412678_0385 (dnaX)
DNA replication proteins [BR:
ecor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMEA4412678_0385 (dnaX)
DNA repair and recombination proteins [BR:
ecor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMEA4412678_0385 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
AAA_16
AAA_5
AAA_18
AAA_14
DNA_pol3_tau_5
AAA_30
nSTAND3
Mg_chelatase
TIP49
Rad17
AAA_19
TsaE
Sigma54_activ_2
AAA_28
SKI
AAA_assoc_2
Herpes_Helicase
Nitroreductase
PEP-utilizers_C
AAA_24
ABC_tran
DUF815
Motif
Other DBs
NCBI-ProteinID:
SNW07009
UniProt:
A0A8B4GB96
LinkDB
All DBs
Position
1:383010..385274
Genome browser
AA seq
754 aa
AA seq
DB search
MAYQVLARKWRPKTFADLVGQEHVVKALQNALGKGRLHHAYLLTGTRGVGKTTIARILAK
SLNCETPHEGEPCGQCQSCRDIDAGRFVDLLEIDAASNTGIDNIREVLENAQYAPTAGKY
KVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPVTVLSRCLQFVLRNMTA
QQVSQHLAHVLTSEQIPYEAPALALLGRAAAGSMRDALSLLDQAIAMGSGSVTEADVRQM
IGAVDQHYLYSLLQAAANQDGAVLLATAQEMAGRAIGFDSALSELALLLQKLALIKTIPA
AVPADDPERDTLQQLAGQLGDEQIQLYYQCVIHGKQDLPLAPDEYAGFVMTLLRLLAFAP
LAAAELPEGSQISGSELHDPAPKPRPAATPQPDKPPRLAENHIAEAPPAQAEPRLPESGH
NSQNEHGSFSGSPNNNGRLSQNNPLPQATATAARHTERLPENISGSPNSRHELSPNPNAS
GNPAPGLAEPGRPYPSEPQPTQTEAVPTAFESNPPWDDAPPPAGFETRQPDSPPSSGLAE
TEPSQNPANEFPHSRNQNDSLPQHKHDAASRNESGLGSERLPETEQSGFLQSPNGQTEAQ
SAAAETPEHTGTAALPLPDADTWPHIVAAIAPKIGAAQMSAQHTACLGYDPQQHLLTLAV
AEAGQVSISREHIQRIEQHLAAAYGHPVSIRTIDWPADGNAAETPAMRQQRLRQAARDQA
QSLLEQDSAAQDILNLFGARWLPESLVLQGNSQT
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggcctaccaagttctcgcccgcaagtggcgccccaaaacctttgccgatttagtcggg
caggaacacgttgtcaaagccctgcaaaacgccctgggcaaaggccgcctgcaccacgcc
tatctgcttaccggcacgaggggcgtgggcaaaactaccatcgcccgcatcctcgccaaa
agcctcaactgcgaaaccccgcacgaaggcgagccttgcggacaatgccaatcctgccgc
gacatcgacgccgggcggtttgtggatctgctggaaatcgacgccgcctccaacaccggc
atcgacaacatccgcgaagtgctggaaaacgcccaatacgctcccaccgccggcaaatac
aaagtctatatcatcgacgaagtgcacatgctctccaaaagcgcgttcaacgccatgctc
aaaacgctggaagagccgcccgaacacgtcaaattcatcctggccaccaccgacccgcac
aaagtgcccgttaccgtgctcagccgctgcctgcaattcgtgctgcgcaacatgaccgcc
cagcaggtatcgcagcaccttgcgcacgttctgaccagcgaacaaatcccctacgaagcc
cccgccctcgccctgctcggccgtgccgccgccggctccatgcgcgacgcgctcagcctg
ctcgaccaagccatcgccatgggttctggcagcgtaaccgaagccgacgtgcgccaaatg
atcggcgccgtcgaccaacactacctttattccctactgcaagccgccgccaaccaagac
ggcgccgtcctgctcgccaccgcacaggaaatggccggccgcgccatcggtttcgacagc
gccttgagcgagctcgccctcctgttgcaaaagctcgccctcatcaaaaccatccccgcc
gccgtgcccgcagacgaccccgagcgcgataccctgcaacagctcgccggccaactgggc
gacgaacaaatccagctgtattaccaatgtgttatccacggcaagcaagacctgccgctc
gcgcccgacgaatacgccggcttcgttatgaccctgctgcgcctgctcgcattcgccccc
ctggccgcagccgaactgcccgaaggcagccaaatcagcggcagcgaactgcacgacccc
gccccaaagccccgtccggctgccacaccgcagccggataagccccccagactggctgaa
aaccatatagcagaagcccctcccgcccaagccgaaccaaggctacctgaaagcgggcat
aacagccaaaatgaacacggcagcttttcaggtagcccaaacaacaacggcaggctttcg
caaaacaaccccctgccgcaagcaactgccaccgctgcccgccataccgaaaggctacct
gaaaatatttcaggcagtccaaacagccggcacgagctttcgcccaacccaaacgcatcc
ggcaaccctgcgcccggtttggccgaacccggccgcccctaccctagcgagccgcaacct
actcagacagaagccgtccctaccgccttcgaaagcaacccgccgtgggacgatgccccg
ccgcccgccggttttgaaacccggcagcccgacagccccccaagctcagggctagctgaa
accgagcccagccaaaaccccgcaaacgagtttccgcatagccgaaaccaaaatgacagc
ctgccccagcacaaacatgatgccgcatcccgaaacgaatccggattaggcagcgaaaga
ctacctgaaaccgaacaaagcggatttttacagagcccaaacgggcaaaccgaagcccaa
tcggccgctgccgaaaccccggaacacaccggcacggctgccctgcccctgcccgatgcc
gacacctggccgcacatcgtcgccgccatcgcccccaaaatcggtgccgcccaaatgagc
gcccagcacaccgcctgcctcggctacgacccgcagcaacacctgctcacccttgccgtg
gccgaagccgggcaagtcagcatcagccgcgaacacatccagcgcattgagcagcacctg
gctgccgcctatggccatcccgtcagcatccgcaccatcgattggccggccgacggcaac
gccgccgaaactcccgccatgcgccaacagcgcctgcgccaggctgcccgcgatcaagca
caaagcctgctggagcaagactccgccgcgcaagatatcctcaatctattcggcgcccgc
tggctgcctgaaagccttgtattgcagggaaacagccaaacctaa
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