Eikenella corrodens: SAMEA4412678_0461
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Entry
SAMEA4412678_0461 CDS
T05039
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ecor
Eikenella corrodens
Pathway
ecor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA4412678_0461 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecor03400
]
SAMEA4412678_0461 (mutM)
Enzymes [BR:
ecor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SAMEA4412678_0461 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SAMEA4412678_0461 (mutM)
DNA repair and recombination proteins [BR:
ecor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAMEA4412678_0461 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF1631
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
SNW07204
UniProt:
A0A8B4G1U7
LinkDB
All DBs
Position
1:complement(454369..455190)
Genome browser
AA seq
273 aa
AA seq
DB search
MPELPEVETTRRGIQPYMQGKTVAEVVVRQPKLRWPVSPDLAQQLASSHIVYIHRRAKYL
LFEFPHGVMLLHLGMSGSLRVYPNDSAPPPEKHDHIDIITVDQTVLRLRDPRRFGSVLWF
TGAAEQHPLLQHLGPEPLQEEFTSGYLKNALSRRKSAIKTALMDNKVVVGVGNIYANEAL
FAAGILPTRRADRVSAEECRRLVVEIRNVLHCAIEVGGSSLRDFVHSDGQSGYFQQQYHV
YGREGEPCHHCGTPIARQIVGQRSSFYCPKCQR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactaccagaagttgaaactacccgacggggtatccagccctatatgcagggc
aaaaccgtggccgaagtggtggtgcgccagccgaaattgcgttggccggtgtcgcctgat
ttagcgcagcagcttgccagcagccatattgtgtatattcatcgccgtgccaagtattta
ctgtttgagtttcctcatggcgtgatgctgctgcatttgggtatgtcgggcagtctgcgt
gtgtaccccaatgacagcgccccaccgccggaaaagcacgatcatatcgacatcattact
gttgaccaaactgtgctgcgcctgcgcgatccgcgccgcttcggttcagtgttgtggttt
actggcgcagccgagcaacatccgctattgcaacatttgggccctgagccactacaagaa
gagttcacttcaggctacctgaaaaatgcgctttcacgccgcaaaagcgccatcaaaacc
gcgttgatggataataaagttgtggtgggggtgggcaatatttatgccaacgaagcactg
tttgccgccggcatcctgcccacccgccgtgccgaccgtgtgtctgccgaagagtgccgc
cgtttagtggtggaaatccgtaacgtgctgcactgtgccatagaagttggcggcagcagc
ttgcgcgattttgtgcacagcgacgggcaaagcggctattttcagcagcaatatcatgta
tatggccgcgagggagaaccttgccaccattgtggtacgccgattgcacggcagattgtc
ggccagcgcagcagcttttactgcccgaaatgccagcgttga
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