Eikenella corrodens: SAMEA4412678_0532
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Entry
SAMEA4412678_0532 CDS
T05039
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ecor
Eikenella corrodens
Pathway
ecor03420
Nucleotide excision repair
ecor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA4412678_0532 (uvrD)
03430 Mismatch repair
SAMEA4412678_0532 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecor03400
]
SAMEA4412678_0532 (uvrD)
Enzymes [BR:
ecor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4412678_0532 (uvrD)
DNA repair and recombination proteins [BR:
ecor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4412678_0532 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SAMEA4412678_0532 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
DUF3553
AMMECR1
Gemin7
MOR2-PAG1_mid
DUF943
Motif
Other DBs
NCBI-ProteinID:
SNW07334
UniProt:
A0A8B4G227
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All DBs
Position
1:complement(521482..523683)
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AA seq
733 aa
AA seq
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MLTSAPQNSLLAGLNNEQLSAVTWPAQSALVLAGAGSGKTKVLTTRIAWLLHSGQASLHS
VMAVTFTNKAAKEMRARLEAMLPLNIRAMWLGTFHGLCHRFLRLHHKEAGLPAAFQILDS
SDQLALVKRLLKALNISEEIIAPRALQGFINAQKEAGLRAAVLHASNPFEQRLIECYAEY
DRLCRQEGVADFAELMLRSYEVLQSNEILRTHYQNRFNHILVDEFQDTNKLQYDWLKLLA
GQHAAVFAVGDDDQSIYRFRGARVGNMADFMREFQVASPIKLEQNYRSVGNILAAANAVI
AHNDGRLGKNLRTEAEHGEKIRFLSAFTDGEEAEFVVEEIKALHRDGMDLAQTAVLYRSN
AQSRVLEQTLFRAGLPYKIYGGLRFYERQEIKHALAYLRLAINPDDDNALLRVINVPARG
IGSRTVENIQAAASQEGIPLWQAACHVAVKNGKVATFVRLIESLRGCIGQVGLPDIVAEA
VRSSGLYEYYQNQKGDHQDRLDNLDELIRAAEEFHPEDSTFETLPADVVESPAFPVLAFL
SNAALESGENQAAADESAVQLMTVHAAKGLEFDAVFLTGMEEGRFPSELSLAEHGGLEEE
RRLMYVAITRARQRLYISMAQQRMLHGQTHFGTVSRFVEEIPPDLLHLLTPVLKPRFPVP
EGRPQQRRAEWVAPVAKQDYDGFSIGQNVRHAKFGTGVIIEGERKAGSARLTVNFGKQGI
KVLDTKFAKLEAV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgcttacatcagctccacaaaactccctacttgccggcttgaacaatgagcaactttct
gcggtaacctggccggcgcaatctgctttggtgctggccggtgccggcagcggtaagact
aaagtgcttaccacccgcatcgcttggctcttgcatagtggtcaagccagcctgcattcg
gtgatggcggttacgttcactaataaggctgcgaaagaaatgcgtgcccggctcgaagcc
atgttgccgcttaatattcgcgccatgtggctgggtacgttccatggcctgtgtcaccga
tttctgcgtttgcatcacaaagaagctggtctgccagctgccttccagattttagacagc
agtgaccagctcgctctagtcaaacgcctgctcaaagccctcaatatttccgaagaaatc
atcgccccgcgtgccttacaaggctttatcaatgcgcaaaaagaagcaggtttgcgtgct
gccgtgctacatgccagtaatccgtttgagcagcgcctgattgaatgctatgccgaatac
gatcgtctgtgtcggcaggaaggggtagcagattttgctgaactcatgttgcgtagctat
gaagtgttgcaaagtaacgagattctgcgtacgcactaccaaaaccgcttcaaccacatt
ttggtggacgaattccaagacaccaataaattgcaatacgattggctcaaactgctggca
gggcaacatgctgccgtatttgccgtgggcgatgacgatcagagcatctaccgtttccgt
ggcgcgcgcgtgggtaatatggctgatttcatgcgtgaatttcaggtagcctctcctatc
aagctggagcagaactaccgttcggtgggcaatatccttgctgcggccaatgccgtgatt
gcccataacgacggccgcttgggcaagaacctgcgcactgaagccgagcatggtgagaaa
atccgtttcctttccgcttttaccgacggtgaagaggccgagttcgtggtagaagaaatc
aaagccctgcaccgcgacggtatggatttggcacaaaccgctgtgctttaccgtagtaat
gcccagtcgcgcgttctcgagcaaaccctgttccgtgccggcctaccttataaaatctac
ggcggcctgcgcttttatgagcggcaggagatcaaacacgcacttgcttatttgcggctg
gcgattaatcccgacgacgataacgccctgttgcgcgtcatcaacgtgcccgcacgcggt
attggcagccgtacggtggaaaacattcaagccgctgcttcgcaggaaggcataccgttg
tggcaggcagcctgccacgtagccgtgaagaacggcaaggtagccacctttgtgcgcctg
attgaaagcttgcgcggctgcatcggccaagtcgggctacctgatattgtggccgaggcc
gtacgcagcagcggcctgtatgagtattaccaaaaccaaaagggcgatcatcaagaccgc
ttagacaacttagacgaactcatccgagcggctgaagaattccaccctgaagacagtacg
tttgaaaccctgcccgctgatgtcgtagagagcccggcattccccgtgcttgcctttttg
agcaatgctgcgcttgaatctggcgagaaccaggccgccgccgatgagtctgccgtacag
ttgatgactgtgcatgcggccaaagggctggagtttgacgccgtattcctcaccggcatg
gaagaaggccgtttccccagcgaattgagcctggctgaacacggcgggctggaggaagag
cggcggctgatgtatgtggccatcacgcgcgcacggcagcggctctacatcagcatggcg
caacagcggatgttgcacggccaaacccattttggtaccgtatcgcgctttgtggaagaa
attccgcccgatttactgcatttactcactcccgtgctaaaaccacgttttcccgtgccc
gaaggccggcctcaacagcgcagggcagaatgggttgcaccggtggcgaagcaggattac
gacggcttcagcatcggccaaaatgtgcggcacgccaaattcggcaccggcgtaatcatt
gagggggagcgcaaagccggcagcgcccgcctcaccgtaaactttggcaagcagggcatc
aaagtgctggacactaaatttgccaaactggaagctgtgtga
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