Eikenella corrodens: SAMEA4412678_0566
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Entry
SAMEA4412678_0566 CDS
T05039
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ecor
Eikenella corrodens
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecor03032
]
SAMEA4412678_0566 (ihfB)
03036 Chromosome and associated proteins [BR:
ecor03036
]
SAMEA4412678_0566 (ihfB)
03400 DNA repair and recombination proteins [BR:
ecor03400
]
SAMEA4412678_0566 (ihfB)
DNA replication proteins [BR:
ecor03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SAMEA4412678_0566 (ihfB)
Chromosome and associated proteins [BR:
ecor03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SAMEA4412678_0566 (ihfB)
DNA repair and recombination proteins [BR:
ecor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SAMEA4412678_0566 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
SNW07380
UniProt:
A0A1A9RMD8
LinkDB
All DBs
Position
1:557520..557822
Genome browser
AA seq
100 aa
AA seq
DB search
MTKSELMAHLAEKYLAQGHSRLAVKDVEQSVKVLVDAMTRALARGQRIEIRGFGSFDLNH
RPARIGRNPKTGEKVNVPEKYVPHFKAGKELRERVDQAAK
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcagagttgatggcccatctggccgagaagtacctggctcaagggcattcc
cgcctggctgttaaggatgtggagcaaagcgtgaaggttttggtggatgccatgacccgt
gcgctggctcgtggtcagcgtatcgagattcgcgggttcggcagtttcgacctgaaccat
cgtccggcacgcatcggccgtaacccgaaaaccggcgaaaaagtgaacgtgcccgaaaaa
tacgtgccgcacttcaaagccggcaaggaattgcgcgaacgcgtagaccaagccgccaag
taa
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integrated database retrieval system
