Eikenella corrodens: SAMEA4412678_0656
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Entry
SAMEA4412678_0656 CDS
T05039
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
ecor
Eikenella corrodens
Pathway
ecor03030
DNA replication
ecor03430
Mismatch repair
ecor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA4412678_0656 (holC)
03430 Mismatch repair
SAMEA4412678_0656 (holC)
03440 Homologous recombination
SAMEA4412678_0656 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecor03032
]
SAMEA4412678_0656 (holC)
03400 DNA repair and recombination proteins [BR:
ecor03400
]
SAMEA4412678_0656 (holC)
Enzymes [BR:
ecor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA4412678_0656 (holC)
DNA replication proteins [BR:
ecor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMEA4412678_0656 (holC)
DNA repair and recombination proteins [BR:
ecor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMEA4412678_0656 (holC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
SNW07548
LinkDB
All DBs
Position
1:complement(649066..649509)
Genome browser
AA seq
147 aa
AA seq
DB search
MPTVTFYTHVADLETFACRLAKRAVEAGCRVLAWCGGTEQLATLDRQLWAFEAESFLPHE
IWLPKENPCPIEPPILLAEGEALPTAESSLVVLNLSADLWSHAPNTPERVLEIVGRSETQ
LAAARRRFAAYRNGGFKIEHHNMQGKA
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccgttaccttctacacccacgttgccgatttagaaaccttcgcctgccgcctg
gccaaacgcgcggtcgaagccggctgccgcgtgctggcttggtgcggcggcacggagcag
ctggcaaccctcgaccgccaattgtgggcgtttgaggccgaaagcttcctgccgcacgaa
atctggctgccaaaagaaaacccgtgtccgatagaaccaccgatactgctggctgaaggc
gaagccctgcccacagcagaaagcagcctggtggtgctgaatttatcggcagacttgtgg
agccatgcgccgaatacgccggagcgtgtgctggaaatcgtgggccgcagcgaaacccag
cttgctgccgcccgccgccgctttgctgcctaccgtaacggcggtttcaaaatcgaacac
cacaatatgcagggcaaagcctag
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