Eikenella corrodens: SAMEA4412678_0834
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Entry
SAMEA4412678_0834 CDS
T05039
Symbol
recC
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ecor
Eikenella corrodens
Pathway
ecor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SAMEA4412678_0834 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecor03400
]
SAMEA4412678_0834 (recC)
Enzymes [BR:
ecor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SAMEA4412678_0834 (recC)
DNA repair and recombination proteins [BR:
ecor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAMEA4412678_0834 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
SNW07968
UniProt:
A0A8B4G720
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All DBs
Position
1:833495..836740
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AA seq
1081 aa
AA seq
DB search
MLHLYSSNRLEFLAETAVALMWTTPLKAVLAPEEIVVQSQGMRRYLNHYLAERSGIAANL
NFSLPAALSWQLTRRFLPDAPRLNPFAPEVLRWRLLSLLENADSALPAVLQGYLKSSTAA
AYHLAGRLADVFDQYLVYRPHWLAQWEQGKLNGLGADEAWQAALWRTLAADTPVAHRAAQ
HERLLAALNPARLPQRYLAFGISTLAPVYLDLLQALAEHTDVHLFAVNPSQQYWGDIQSP
KRLAAQAEPAAEEAGHPLLSSLGKQGRDFFDRLAVSTRAMEQVELFPAPSESPSLLQHLQ
ADIQLLRLPEKGSAQMDGSIVIQAAHSPLRELQILKEHLLRRLADNPELQPHHIAVLTPA
VEDYLPFIHAVFGEAAPGSRALPYSVADVRLSRSQPLMLLAEQLIALMQSRFETERLLPL
LDAQAVRRHWQIDETDAEFLRRSVAELNVHWGADAEMRAEHSGSGKVFTWQQATERSVLG
WLLPEGEGTLWQGVHPWPADFARQPAQAAWFVLLGKLREHHRRWQSPASIEGWIERFRAL
LADAAGDTPDEADQAAWQQISQALAAWQEEAALAGYTAALPPDNACQHLRRFFGQSSEAA
FLRGGITFCSMVPMRSLPFDTVCLLGLNDGKYPRQTPAPAFDLIARHPQSGDRSRRDDDR
YLFLESLLSARSHLYLSYIGRDHLKDEAQAPSPLLSELIDTLAQMAGQSSADFAAAHVRQ
HPLQAFSTRYFVPQQDGESSAELSENGLSGSLSGLRQDYAQALNQPAAEAAPFIGDTLPE
AAGEPTVSLDSFLNFWSNPVRHWLRRALQWKGPYADRPADSAEPYAIEHTDEVKQRYLDA
RRHREDFAQTEAKLQADSLLPAGLLGEILQEPERTAAKQLDSELLASPREPDFPFRFEYG
GHTLVGSLTHLHQHGQIFYHAAELKAPAEIRLWLQHLVYCAVHPKAQATHLVSLDSPQTL
PPLPQTEAAEQLARWLDYYLLGQQQPLPFFPRTSLAAAKACTAKDLSAQGLPEAALKAAR
SKYRDSRDYPGQNQDREVAQVYGRDEDEPINSPLFARLVLELLAPLHLCIAPKESKGKKA
G
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgctccacctttattcttccaaccgcctagaattccttgccgaaaccgccgttgcgctg
atgtggactacgccgctgaaagcggtgttggcgccggaagaaatcgtggtgcagagccag
gggatgcgccgttatctcaatcattatttagccgagcgcagcggcattgcggccaatttg
aatttcagcctgcctgcagccctgagctggcagctcacgcgccgcttcctgcccgatgcg
ccgcgcctgaacccgtttgcgccggaagtgttgcgctggcggctgctgtcgctgttggaa
aatgccgattcggctctgccggccgtattgcagggctacctgaaaagcagcacggcggcg
gcctatcatttggcggggcggctggcagacgtgttcgaccaatatttggtgtaccgcccg
cattggctcgcgcaatgggagcagggcaagctcaacggcttgggcgcagatgaagcctgg
caggccgcgttgtggcgcacgctcgccgccgacacccccgtcgcccaccgtgccgcgcag
cacgaacggctgctggccgcgctgaatccggcgcgcctgccgcagcgttatttggcgttc
ggcatttccacactggcgccggtgtatctggatttgttgcaggccttggccgaacacacc
gatgtgcacctgtttgcggtcaaccccagccaacaatactggggcgacatccaaagcccg
aaacggctggccgcacaggccgaacccgcagccgaagaagccggccacccgctgctctcc
tcgctgggcaaacaggggcgcgactttttcgaccgcctggccgtgagcacccgcgccatg
gagcaggtggaactcttccccgcgccgtccgaatcgcccagcctgctgcaacacctgcag
gccgacatccagctgttgaggctacctgaaaaaggcagcgcgcagatggacggcagcatc
gtgatccaagccgcccacagccccctgcgcgagctgcaaatcctcaaagaacacctgttg
cgccgtttggcggacaaccccgagctccagccgcaccacatcgccgtgctcacccccgcc
gttgaagactacctgcccttcattcacgccgtgttcggcgaagccgcgcccggcagccgc
gccctgccgtattccgtggccgacgtgcgcctcagccgcagccagcctttgatgctgctg
gccgagcagctcatcgccctgatgcagagccgattcgaaaccgaacgcctgctgcccctg
ctcgatgcccaagcggtgcgccgccattggcagattgatgaaaccgatgccgaattcctg
cgccgcagcgtggccgaactcaacgtgcattggggcgcggatgccgaaatgcgcgccgag
cacagcggcagcggcaaagtcttcacttggcagcaggccacagaacgcagcgtgctgggc
tggctgctgcccgagggcgaaggtacgttgtggcagggagtgcacccctggccggctgat
tttgcccgccagcctgcccaggccgcctggtttgtgctgctgggcaagttgcgcgagcac
caccgccgctggcaaagccccgcatccatcgaaggctggatcgaacgtttccgcgccctc
ttggccgatgccgcgggcgacacccccgacgaagccgaccaagccgcctggcagcaaatc
agccaggccttggccgcctggcaggaagaagctgcgctggcgggctataccgcagccctg
ccgcccgacaacgcctgccagcacctgcgccgcttcttcggccaaagcagcgaagccgcc
tttttgcgcggcggcatcaccttctgcagcatggtgcccatgcgcagcctgccgttcgat
accgtgtgcctgctcggcctgaacgacggcaaatacccgcgccaaacccccgcccccgcc
ttcgacctcatcgcccgccacccccaatccggcgaccgttcccgccgcgacgacgaccgc
tacctgttcctcgaatccctgctcagcgcccgcagccacctttatctttcctacatcggc
cgcgaccacctcaaagacgaagcccaagccccctcgccgctgttgagcgaactcatcgac
acgctggcgcaaatggccggccaaagcagcgccgatttcgccgccgcccacgtgcgccaa
caccccctgcaagccttttccacccgctactttgtcccgcaacaggatggggaaagttca
gccgaacttagcgaaaacgggctttcaggtagcctatccggcctccgccaagactatgcc
caagccctcaaccaacccgccgccgaagccgcgccctttatcggcgataccctgcctgaa
gctgcaggcgaacccaccgtatcgctcgacagtttcctaaacttctggagcaaccccgtg
cgccattggctacgccgtgccctgcaatggaaaggcccctatgccgaccgccctgccgat
tctgccgagccctacgccatcgaacacaccgacgaagtgaaacagcgctacctcgacgcc
cgacgccaccgcgaagacttcgcccaaaccgaagccaaactgcaggccgacagcctcctg
cccgccggcctgctcggcgaaatcctgcaagagcccgagcgcaccgccgccaagcagctc
gattccgaactgctcgccagcccgcgcgagcccgacttccccttccgtttcgagtacggc
ggccacaccctcgtcggcagcctcacccacctgcaccaacacggccaaatcttctaccac
gccgccgaactcaaagcccccgccgaaattaggctgtggctgcaacacctggtgtattgc
gccgttcaccccaaagcacaagccacccacctcgtctctctcgacagcccgcaaaccctg
ccgccgctgccgcaaacggaagccgccgagcaacttgcccgctggctcgactactacctg
ctcggccaacaacagccgctgcccttcttcccccgcaccagcctggccgccgccaaagcc
tgcaccgccaaagacctctctgcccaagggctacctgaagcagccctcaaagctgcccgc
agtaaataccgcgatagccgcgactaccccggccaaaaccaagatcgcgaagtcgcccaa
gtgtacggccgtgatgaagacgagccaattaacagtcccctgttcgcccgcctcgtttta
gagctgctcgccccgctgcatttatgcatcgcgcccaaagagagcaaaggcaaaaaagct
ggttaa
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