Eikenella corrodens: SAMEA4412678_0897
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Entry
SAMEA4412678_0897 CDS
T05039
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ecor
Eikenella corrodens
Pathway
ecor03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SAMEA4412678_0897 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecor03019
]
SAMEA4412678_0897 (rnc)
03009 Ribosome biogenesis [BR:
ecor03009
]
SAMEA4412678_0897 (rnc)
03036 Chromosome and associated proteins [BR:
ecor03036
]
SAMEA4412678_0897 (rnc)
Enzymes [BR:
ecor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SAMEA4412678_0897 (rnc)
Messenger RNA biogenesis [BR:
ecor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAMEA4412678_0897 (rnc)
Ribosome biogenesis [BR:
ecor03009
]
Eukaryotic type
90S particles
RNase
SAMEA4412678_0897 (rnc)
Prokaryotic type
rRNA processing factors
SAMEA4412678_0897 (rnc)
Chromosome and associated proteins [BR:
ecor03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SAMEA4412678_0897 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
SNW08154
UniProt:
A0A8B4GEE5
LinkDB
All DBs
Position
1:895112..895885
Genome browser
AA seq
257 aa
AA seq
DB search
MSKPTAKPRKIPKPDPRRARAGEELQRHLGHSFQNPRLFEQALTHRSYSAQNNERFEFVG
DAILDYSVAKMLFDAFPGYSEGELSRLRANLVNQDVLAEIARSMGVGDALYLGVGELKSG
GFDRPSILADAVEALLAAISFDADFAAAEQTVRRLFARRIANIDLSNQGKDPKTLLQEAL
QARRLPLPKYRIEHQSGEGCDARFDIACDLGELAHITRAQAASRRAAEQAAAKEALDWLQ
EHHPLPGKNKKHRQSRA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacccaccgccaaaccccgcaagatcccgaagcccgatccgcgccgcgcccgg
gccggcgaagagctgcaacgccatctcggccacagcttccaaaatccccgcctcttcgag
caggcgcttactcaccgcagctacagcgcccaaaacaacgaacgcttcgagtttgtcggc
gacgccatcctagattacagcgtggccaaaatgctgttcgacgccttccccggctatagc
gaaggcgaactctcccgcctgcgcgccaatttggtcaaccaagacgtgctcgccgaaatc
gcccgcagcatgggcgtgggcgacgcgctttatttgggcgtgggcgaactcaaaagcggc
ggtttcgaccgcccctccatcctggccgacgccgtggaagccctgctggccgccatcagc
ttcgatgccgatttcgccgccgccgagcaaaccgtgcgccgcctgtttgcccggcgcatt
gccaacatcgacttaagcaaccagggcaaagacccgaaaaccctgcttcaagaagccctg
caagcccgccgcctgcccctgcccaaataccgcattgaacaccagtccggcgagggctgt
gatgcccgtttcgatatcgcctgcgatctgggcgaactcgcccacatcacccgcgcccaa
gccgccagccgccgcgccgccgaacaagctgcggccaaagaggcgctggattggctgcag
gaacatcaccccctgcccggcaaaaacaaaaaacaccgccaatcccgtgcctga
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