Eikenella corrodens: SAMEA4412678_1015
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Entry
SAMEA4412678_1015 CDS
T05039
Symbol
uvrA
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ecor
Eikenella corrodens
Pathway
ecor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA4412678_1015 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecor03400
]
SAMEA4412678_1015 (uvrA)
DNA repair and recombination proteins [BR:
ecor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4412678_1015 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SAMEA4412678_1015 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_16
AAA_23
nSTAND1
RsgA_GTPase
AAA_22
AAA_25
DnaJ_CXXCXGXG
nSTAND3
Viral_helicase1
cobW
T2SSE
Motif
Other DBs
NCBI-ProteinID:
SNW08423
UniProt:
A0A8B4G389
LinkDB
All DBs
Position
1:complement(1017870..1020719)
Genome browser
AA seq
949 aa
AA seq
DB search
MCKHNHPHPTRDNDTIRIRGARTHNLKNVDLDIPRHKLVVVTGLSGSGKSSLAFDTLYAE
GQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYL
RLLYARVGTPYCPEHNLPLSSQTVSQMVDAVLTLPEDTRVMILAPAVRERKGEFVDFFAD
LQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRVKVKADIKQRLAESFETALRHG
NERALAMEMDSGEEHWFSARFACPVCSYSLPELEPRLFSFNNPMGSCPTCDGLGNTNFFD
PEKVVAHPELSLATGAIDGWDKRNQFYFQMIQSLARHYGFDVQAAWETLPEKVKKVVLHG
SGKEVIDFTYLSERGTTFNRSHAFEGIIPNLERRYRETDSETVREKLREYQNHRACPSCG
GARLRKEARYVYVSGEPLHEVSAWPLTKTHQFFETLDLDGNKKQIAEKILKEITERLGFL
INVGLDYLNLSRSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLAT
LKRLRDLGNSVIVVEHDEDAIREADFVVDMGPGAGEHGGNVLIADTPENVAKCENSVTGQ
YLSGKKSIAVPSERTPVNPERMLVLKGARGNNLKNVTLELPLGLITCITGVSGSGKSTLI
NDTLAKITARELNRAQEEPAPYDDIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPI
RELFAGVPLSRERGYNVGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRY
NRETLEIQYKGKNISQVLDMTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLS
GGEAQRVKLALELSKRDTGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHN
LDVIKTADWIVDLGPEGGDGGGRIIAEGSPEQVAKVKGSYTGKYLRINL
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaaacacaaccacccacaccccacccgcgacaacgacaccatccgcatccgcggc
gcgcgcacgcataatttgaaaaacgtcgatttggacattccgcgccacaagttggtggtg
gtcacggggctgtcaggcagcggcaagtcgtcgctggcgtttgacacgctgtatgccgaa
gggcagcggcgttatgttgagagcctgtccgcctatgcgcggcagtttttgcagatgatg
gacaaacccgacgttgatttgattgaaggcttatcgcccgcgatttctatcgagcagaaa
tccaccagccacaacccgcgttccaccgtcggcacggtaacggaaatccacgactacctg
cgccttttgtacgcccgcgtcggtacgccgtattgccccgaacacaatctgccgctttcg
agccagaccgtgtcgcagatggtcgatgccgtcttgacgctgccggaagacacgcgcgtg
atgattctggcgccggcggtgcgcgagcgtaagggcgagtttgtcgatttctttgccgac
ttgcaggcgcagggttttgcgcgggtgcgcgtggacggcgaggtctatcagttggacgaa
gtgccgaagctggaaaaaaacatcaagcacaatatcgacgtggtcatcgaccgcgtgaaa
gtgaaggcggacatcaagcagcggctggcggaaagttttgaaaccgcgctgcgccacggc
aacgagcgcgcattggcgatggaaatggacagcggcgaagagcattggttttccgcgcgg
tttgcctgccctgtgtgttcgtacagcctgccagaattggagccgcgcctgttttcgttc
aacaacccgatgggttcctgcccgacttgcgacggcttgggtaacaccaatttcttcgac
cctgaaaaagtagtcgcccaccccgaattgtcgctggcaacgggcgcaattgacggctgg
gacaagcgcaaccagttctatttccaaatgattcagtcgctggcgcggcattacggtttc
gacgtgcaggctgcttgggaaacgctacctgaaaaagttaaaaaagtcgtgctgcacggc
tcaggcaaagaagtcattgatttcacttacctgtccgaacgcggcactaccttcaaccgc
agccacgccttcgaaggcatcatccccaatctcgaacgccgctaccgtgaaaccgacagc
gaaaccgtgcgcgaaaaactgcgcgaataccaaaatcaccgcgcctgcccgagctgcggc
ggcgcacgtttgcgcaaagaagcgcgctacgtttacgtcagcggcgaacctttgcacgaa
gtctccgcctggccgctcaccaaaacccaccaattctttgaaacgctggatttggacggc
aacaaaaaacaaatcgccgaaaaaatcctcaaagaaattaccgaacggctcggcttcctg
attaacgtcgggctggattacctcaatctctcccgctccgccgaaaccctctccggcggc
gaagcccagcgcatccgcctcgccagccaaattggcagcggcctgactggcgtgatgtac
gttttggacgaaccctccatcggcctgcaccagcgcgacaatgaccgcctgctcgccacc
ctcaaacgcctgcgcgatttgggcaacagcgtgattgtggtagaacacgacgaagacgcc
atccgcgaagccgatttcgtcgtcgatatgggccccggcgcaggcgaacacggcggcaac
gtactgattgccgacacgcccgaaaacgtcgccaaatgcgaaaactccgttaccggacaa
tacctcagcggcaaaaaatccattgccgtgccgtctgaacgcacgcccgtcaatcccgag
cggatgctcgtcctcaaaggcgcgcgcggcaacaacctcaaaaacgtaaccctcgaactg
ccgctcggtttgattacctgcatcaccggcgtatccggcagcggcaagtctaccctgatt
aacgacacccttgccaaaatcaccgcccgcgaactcaaccgcgcccaagaagaacccgcc
ccatacgacgacatccgcggcctcgaacacctcgacaaagtcatcaacgtagaccaatcc
cccatcggccgcaccccgcgctccaaccccgccacctacaccggcctgttcacccccatc
cgcgaactcttcgccggtgtacccctctcccgcgaacgcggctacaacgtcggcagattc
tccttcaacgtcaaaggcggccgctgcgaagcctgccaaggcgacggcgtgattaaagtc
gaaatgcacttcctgcccgacgtgtacgttccctgcgaagtctgccacggcaaacgctac
aaccgcgaaacgctcgaaatccaatacaaaggcaaaaacatcagccaagtcctcgacatg
accgtcgaagaagcccgcgaatttttcgacgccgtccccaccgtatcgcgcaaactgcaa
accctgatggacgtgggcctcggctacatccgcctcggccagtccgccaccaccctctcc
ggcggcgaagcccagcgcgtcaaactcgccttggaactctccaaacgcgacaccggcaga
acgctctacatcctagacgaacccaccaccggcctgcacttcgccgacatcgccctgctg
ctggaagtcataggtcgtctgaaaggcaaaggcaactcgattgtgattatcgagcataac
cttgacgtgattaaaactgcggactggattgtggatttggggccggaggggggcgatggc
gggggaaggattattgctgaaggtagccctgagcaggtggcgaaggtgaaggggagttat
actgggaagtatttaagaataaatttgtaa
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