Eikenella corrodens: SAMEA4412678_1415
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Entry
SAMEA4412678_1415 CDS
T05039
Symbol
rluC
Name
(GenBank) Ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
ecor
Eikenella corrodens
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecor03009
]
SAMEA4412678_1415 (rluC)
Enzymes [BR:
ecor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
SAMEA4412678_1415 (rluC)
Ribosome biogenesis [BR:
ecor03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SAMEA4412678_1415 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
SNW09465
UniProt:
A0A8B4GDQ5
LinkDB
All DBs
Position
1:1436181..1437152
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AA seq
323 aa
AA seq
DB search
MPAISKNSVNYLSVDEAAAGQRLDNFLIRLLKGVPKSHIHRIIRGGEVRVNKKRAAADSR
LAAGDEVRIPPIRLAQKAEQAEAAVPPREFDIVFEDEHLLVVDKPSGVAVHGGSGVSFGV
IEQLRRARPQARYLELVHRLDKDTSGLLVVAKKRSALVKLHEAWRNDKPKKVYLALGMGA
WPQGVRQVKLPLFKYTGAAGEKMVRVSEEGQSAHTLFRVLESFGGAPLHAVGLSALSLME
ATLRTGRTHQIRVHMQSQNCPIAGDERYGDYTANRRLKKLGLKRMFLHAHRLELEHPASG
ETLVLTAPLPEELRQMLEGLRQE
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattagcaaaaattcagtcaattatttgagcgtagacgaagcggccgccggg
cagcgtttggataactttctcatccgcctgctcaaaggcgtgcccaagagccatatccac
cgcatcatccggggcggcgaagtgcgcgtgaacaaaaaacgcgccgctgccgacagccgt
ttggccgcgggcgacgaagtgcggattccgccgatccggctggcgcagaaagccgagcag
gccgaggctgccgtgccgccgcgcgaatttgacattgtgtttgaagacgagcaccttttg
gtagtggacaaaccttccggcgtggccgtgcacggcggtagcggcgtgagcttcggcgtg
atcgaacagctgcgccgcgcccggccgcaggcgcgttatttggaattggtacaccggttg
gacaaagataccagcggattattggtggtggccaaaaagcgcagcgcattggtgaaactg
cacgaagcctggcgcaacgataagccgaaaaaagtatatttggcgctgggcatgggcgcg
tggccgcagggcgtgcggcaggtgaagctgccgctgttcaaatacaccggcgcggcaggc
gagaaaatggtgcgcgtgagcgaagaagggcagagcgcgcacacgctgttccgcgtgctg
gaaagcttcggcggcgcgccgctgcacgcggtggggctttccgccctgagcctgatggaa
gccacgctgcgcaccggccgcacccatcaaatccgcgtgcacatgcagtcgcaaaactgc
ccgattgccggcgacgaacgctacggcgactacaccgccaaccgccgcctgaaaaagctc
ggcctcaaacgcatgttcctgcacgcccaccgcttggagctcgaacacccggcaagcggc
gaaacgctggtgctcaccgcgccgctgccggaagagctgcgtcagatgctggagggcttg
cggcaggagtaa
DBGET
integrated database retrieval system
