Eikenella corrodens: SAMEA4412678_1569
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Entry
SAMEA4412678_1569 CDS
T05039
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ecor
Eikenella corrodens
Pathway
ecor03030
DNA replication
ecor03430
Mismatch repair
ecor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA4412678_1569 (dnaE)
03430 Mismatch repair
SAMEA4412678_1569 (dnaE)
03440 Homologous recombination
SAMEA4412678_1569 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecor03032
]
SAMEA4412678_1569 (dnaE)
03400 DNA repair and recombination proteins [BR:
ecor03400
]
SAMEA4412678_1569 (dnaE)
Enzymes [BR:
ecor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA4412678_1569 (dnaE)
DNA replication proteins [BR:
ecor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMEA4412678_1569 (dnaE)
DNA repair and recombination proteins [BR:
ecor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMEA4412678_1569 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
SNW09667
UniProt:
A0A8B4GH76
LinkDB
All DBs
Position
1:1583624..1587055
Genome browser
AA seq
1143 aa
AA seq
DB search
MTAPVYIPLRQHTEFSITDGTLRIKELVKKASAFGLPALGISDLMNTFGLVKFYKACRGA
GIKPVVGADVWVANPENPEQPFRAMLLVRNEAGYRRLCELLTRAYVGTDRNVAHAELEPQ
WLAEGGNEGLICLSGAHLGEVGRQLMNGHDSAACAAAQKYAQWFPDAFYLELQRLPEKPE
WETSVSGSLKLAAELGLPVVATHPAQFLNPDDFKAHDARVCIAGGWVLADKRRPRDFVAG
QYFASPEEVAARFADLPEALQNTVEIAKRCNLTLTLGKNFLPQFPTPDGMSLDDYLAHLS
NQGLRERLAALYPDEAEREQKLPEYQARLDFELGTIVQMGFPGYFLIVADFINWAKNNGC
PVGPGRGSGAGSLVAYSLKITDLDPLRYALLFERFLNPERVSMPDFDIDFCQNNRGRVIE
YVRQKYGFEAVSQIVTFGTLSSKAVIRDVGRVLELPFGVCDRLSKLIPLEANKPLSLEKA
MEAEPEIAKVLEEEEAEELMELAKKLEDLTRGLGMHAGGVLIAPGKISDFCPVYQADESA
SPVSMYDKGDVEDIGLVKFDFLGLRNLTIIEMAQEFIAQTTGERIDVNHIDLTDQQAYEV
FRKANTTAVFQFESTGMKKMLAQANTTKLEEIIAFVSLYRPGPMDLIPDFIARMKGARFE
YMHLLLEPVLQPTYGIMVYQEQVMQAAQVIGGYSLGGADLLRRAMGKKKPEEMAKHREIF
AEGAAKQGIAREKADEIFDYMEKFAGYGFNKSHAAAYALVAYQTAWLKAHYPAEFMAATM
SSELDNTDQLKLFYDDARDNGIRFLPPDVNHSGYHFQPDAQHRIRYALGAIKGTGEAAVE
AIVAAREEGGAFKSLFDFCERVSRQHINRRTIEALVRGGAFDSIEPNRARLLANIDLAMS
NAEQQEENANQGGLFDMVEDAIAPLEMIDVPAWGEAELLAEEKQAIGFYFSGHPFGPAEK
EVRQFAPTRLSQLKPNDNVRVAGFATAIRSMVGKRGKIAFITLEDTGGKAEVMVSGETLE
QLGRDTPRADQVLIAECRISRDDYGGEDGLRIIANRVYTLQEARSHYARALTLHLAPHHN
IPCLAELLQRSGEGKRVPLRLHYANGQASGELIPDSRWQPCLTTELLEELVSLLGERQVG
VNW
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccctgtttatatccccctgcgccaacacaccgaattttccatcaccgacggc
actttgcgcatcaaagagctggtgaagaaggcctccgctttcggcctacccgcgctgggc
atcagcgatttgatgaacacgttcggcctggtgaaattctataaagcctgccgcggcgcg
ggcatcaagccggtggtgggggcggatgtgtgggtggcgaatccggaaaaccccgagcag
cctttccgcgccatgctcttggtgcgcaacgaagcgggctaccgccgcctgtgcgagctg
ctcacccgcgcttatgtgggcacggatcgcaatgttgcccacgccgagctggagccgcaa
tggctggccgaaggcggcaacgaagggctgatctgcctgtccggcgcgcatttgggcgaa
gtgggccgccagctgatgaacggccatgacagcgccgcctgcgccgccgcgcagaaatac
gcgcaatggtttcccgatgctttttatttggaactgcaaaggctacctgaaaaaccggaa
tgggaaacttcggtttcaggtagcctcaaattggcggcagagctgggcttgcccgtggtg
gccacccatccggcgcagtttttaaaccccgacgatttcaaggcgcacgatgcgcgcgtg
tgcattgccggcggctgggtgctggccgataaacgccgcccgcgcgattttgtggccggc
cagtattttgcttcgccggaagaggtggccgcccgttttgccgatttgcccgaggcattg
caaaacacggtggaaatcgccaagcgctgcaacctcacgctcacgctgggcaaaaacttc
ctgccgcagtttcccacgcccgacggcatgagcttggacgactatctcgcccacttatcc
aaccaaggcctgcgcgaacggctggccgcgctttatccggatgaggcggaacgcgaacaa
aagctgccggaataccaggcgcggctggatttcgagctgggcaccatcgtgcagatgggc
ttcccgggctacttcctgattgtggccgacttcatcaactgggcgaaaaacaacggctgc
ccggtggggccggggcgcggctcgggtgcgggctcgctggtggcttattccttaaaaatt
accgatttagacccgctgcgctatgcgctgctgtttgagcgtttcctcaatcccgagcgc
gtgtcgatgcccgacttcgatatcgacttctgccaaaacaaccgcggccgcgtgattgaa
tatgtgcgccaaaaatacggcttcgaggcggtgagccagattgttaccttcggcactttg
tcgtctaaagcggtgatccgcgacgtggggcgtgtgctggagctgccgttcggcgtgtgc
gaccggctctccaagctgattccgttggaagccaacaagccgctgagcctggaaaaggcg
atggaggccgagccggagatcgccaaggtgttggaagaggaagaggccgaagagctgatg
gagctggccaaaaagctggaagacctcacgcgcgggctgggcatgcatgccggcggcgta
ttgattgcgccgggcaagatttccgatttctgcccggtgtatcaggccgacgaatccgcc
tcgcccgtttccatgtacgacaaaggcgacgtggaagacatcgggttggtgaagttcgac
ttcctcggcctgcgcaatctcaccatcatcgaaatggcgcaggaattcattgcgcaaacc
accggcgagcgcatcgatgtgaaccacatcgacctcaccgaccagcaagcctacgaagtg
ttccgcaaggccaacaccacggcggtgttccagtttgaatccaccggcatgaaaaagatg
ctggcgcaggccaataccaccaagttggaagaaatcatcgcctttgtgtcgctctaccgc
cccggcccgatggatctgattccggatttcattgcccgcatgaagggtgcgcgctttgaa
tatatgcacctgctgctcgagcccgtgttgcagcccacctacggcatcatggtgtatcag
gagcaggtgatgcaggccgcgcaggtaatcggcggctattcgctcggcggggcagactta
ttgcgccgcgccatgggcaagaaaaagccagaagaaatggcgaaacaccgcgaaatcttt
gccgaaggcgcggccaagcagggcattgcccgcgaaaaagccgatgaaatcttcgactac
atggaaaaattcgccggctacggcttcaacaaatcccacgccgccgcctacgccttggtg
gcctaccaaaccgcctggctcaaagcccactatccggccgaattcatggctgccaccatg
tcgagcgagttggataacaccgaccagctcaagctgttttatgacgatgcccgcgataac
ggcatccgcttcctgccgcccgatgtcaaccattccggctaccacttccagcccgacgcc
caacaccgcattcgttatgccctgggcgcgattaagggcaccggcgaagccgcggtagaa
gccattgtggccgcacgcgaagaaggcggcgcattcaagagcctgttcgacttctgcgag
cgcgtgagccgccagcacatcaaccgccgcaccatcgaagccctggtgcgcggcggcgcg
ttcgacagcatcgagcccaaccgcgcccgcctgcttgccaacatcgacctggccatgagc
aatgccgagcagcaggaagaaaatgccaaccaaggcggcctgttcgatatggtggaagac
gcgattgcccccttggagatgatcgacgtgccagcctggggcgaagccgaacttctggcc
gaagaaaaacaggccatcggcttttatttctccggccaccccttcggcccggccgaaaaa
gaagtgcgccaattcgcccccacccgcctctcccagcttaagcccaacgacaacgtgcgc
gtggccggcttcgccaccgccatccgcagcatggtgggtaaacgcggcaaaatcgccttc
atcacgctggaagacaccggcggcaaagccgaagtgatggttagcggcgaaacgcttgag
cagctcggccgcgacaccccgcgagccgaccaagtgttgattgccgaatgccgcatcagc
cgcgacgactacggcggcgaagacggcctgcgcatcatcgccaaccgtgtttataccctg
caggaagcccgcagccactacgcccgcgccctcaccctgcacctcgccccccaccacaac
attccctgcctggccgaactgttgcaacgaagcggcgaaggcaaacgcgtccccctgcgc
ctgcactacgccaacggccaagccagcggcgagctcatccccgacagccgctggcagcca
tgtttgaccaccgaacttttggaagaactggtgtcgctcttgggcgagcggcaggtgggc
gtgaattggtag
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integrated database retrieval system
