Eikenella corrodens: SAMEA4412678_1661
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Entry
SAMEA4412678_1661 CDS
T05039
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ecor
Eikenella corrodens
Pathway
ecor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA4412678_1661 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecor03400
]
SAMEA4412678_1661 (uvrB)
DNA repair and recombination proteins [BR:
ecor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4412678_1661 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SAMEA4412678_1661 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
Kinesin
Microtub_bd
DUF8543
Motif
Other DBs
NCBI-ProteinID:
SNW09845
UniProt:
A0A8B4G513
LinkDB
All DBs
Position
1:complement(1680996..1683023)
Genome browser
AA seq
675 aa
AA seq
DB search
MDIIQYPNSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLLGVTGSGKTYTMANVIA
QSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSA
INEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEYQQMVLSVKEGDTIEQRDIIA
TLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENALRISLFDDEIDRLDMFDPLSGSL
HQRVGRYTVFPSSHYVTPRDTVVRACESIKEELRERIEFFAREQRPVEQQRIEQRTRFDL
EMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDYLPSNAIMFIDESHVTVTQIGGMYKGD
ASRKQNLVDYGFRLPSARDNRPLKFHEFEKVMPQTVFVSATPAKYEEEHAGQVVEQVVRP
TGLVDPQIIIRPVATQVDDLMSEINDRIQKGERVLVTTLTKRMAEQLTDYYSELGIKVRY
LHSDIDTVERVEIIRDLRLGLFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHRSL
IQTIGRAARNVNGVAILYADKITDSMKAAIDETERRREKQIKFNEEHGIVPQQIKKQVKD
IIDGVYHEEDGGKGRLKGKNKVKVSEIHNEEDAIKEIAKLEKAMQQAARDLQFEEAAVLR
DRIRGIKENLLFGAE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggacatcatccaataccccaattccccattcaaactccaccaacccttcccgcccgca
ggcgaccagccgaccgccattgccggcctgctcgaagggctttcagacggccttgcctat
caaaccctgctcggcgtaaccggttcgggcaaaacctacaccatggcgaacgtcatcgcc
caaagcggccgccccgccattatcatggcgcacaacaaaacccttgccgcccagctctac
gccgaaatgcgcgagtttttccctgaaaacgcggtggaatatttcgtctcctactacgac
tattaccagcccgaagcctatgtgcccagccgcgatttgttcatcgaaaaggacagcgcg
atcaacgaacacatcgagcagatgcgcctttccgccaccaaaaatctgatgacgcgcgac
gacgtgattatcgtcgccaccgtgtccgccatttacggtatcggcgacccgaccgagtat
caacaaatggtattgtccgtcaaagaaggcgacaccatcgagcagcgcgacatcatcgcc
acgctcgtttccatgcagtacgaacgcggggatttggatttcaaacgcggcagcttccgc
gtgcgaggcgacgtgattgacgtgtaccccgccgaaagctccgaaaacgccctgcgcatc
agcctgtttgatgacgaaatcgaccgcctcgatatgttcgacccgctttcaggcagcctg
caccaacgcgtcggccgctacaccgtcttcccgtccagccactacgttaccccgcgcgac
accgtagtgcgcgcctgcgagtccatcaaagaagaattgcgcgaacgcatcgaatttttc
gcccgcgaacaacgccctgtcgaacagcaacgcatcgaacagcgcacccgctttgacctc
gaaatgctctacgaaatgggcttctgcaaaggcatcgaaaactactcccgccacttctcc
ggcaaaaaagaaggcgaaccgccgcccacgctgatggactacctgccaagcaacgccatc
atgttcatcgacgaaagccacgttaccgttacccaaatcggcggcatgtacaaaggcgac
gcatcgcgcaaacaaaacctcgtggactacggcttccgcctgccttccgcccgcgacaac
cgcccgctcaaattccacgaatttgaaaaagtcatgccgcaaaccgtcttcgtctccgcc
acccccgccaaatacgaagaagaacacgccggacaagtggtcgaacaagtcgtccgcccc
accgggctggtcgacccccaaatcatcatccgccccgtcgccacccaagtcgacgactta
atgagcgaaatcaacgaccgcatccaaaaaggcgaacgcgtactcgttaccaccctcacc
aaacgcatggcggagcaactcaccgactattacagcgaactcggcatcaaagtgcgctac
ctgcatagcgacatcgacaccgtcgaacgcgttgaaatcattagagatttgcggctcgga
ctgtttgacgtactcgtcggcatcaacctgttgcgcgaaggcctcgacatccccgaagtc
tccctcgtcgccatcctcgacgccgacaaagaaggcttcctgcgctcccaccgcagcctg
attcaaaccataggccgcgccgcgcgcaacgtgaacggcgtcgccatcctgtacgccgac
aaaatcaccgactccatgaaagccgccatcgacgaaaccgaacgccgacgcgaaaaacag
attaaattcaacgaagaacacggcattgtgccgcagcagattaaaaaacaggtcaaagac
atcatcgacggcgtgtaccacgaagaagacggcggcaaaggccgtctgaaaggcaaaaac
aaagttaaagtcagcgaaatccacaacgaggaagacgcgattaaagaaatcgctaaactg
gaaaaggccatgcagcaggcggctcgagatttgcagtttgaagaggcggcggtgttgcgg
gatagaatacggggaattaaagagaatttgttgtttggggcggagtga
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integrated database retrieval system
