Eikenella corrodens: SAMEA4412678_1907
Help
Entry
SAMEA4412678_1907 CDS
T05039
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ecor
Eikenella corrodens
Pathway
ecor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4412678_1907 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecor03019
]
SAMEA4412678_1907 (recQ)
03400 DNA repair and recombination proteins [BR:
ecor03400
]
SAMEA4412678_1907 (recQ)
Enzymes [BR:
ecor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4412678_1907 (recQ)
Messenger RNA biogenesis [BR:
ecor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAMEA4412678_1907 (recQ)
DNA repair and recombination proteins [BR:
ecor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SAMEA4412678_1907 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
SNW10435
UniProt:
A0A8B4G5M9
LinkDB
All DBs
Position
1:complement(1921979..1923811)
Genome browser
AA seq
610 aa
AA seq
DB search
MPQPSALSILREVFGYHAFRGRQEEIVNALAEGQNLLVLMPTGGGKSLCYQIPALMRRGL
AVVVSPLIALMDDQVAALQAAGVAAASVHSGIGSSQVQQIADTIEAGYLKLLYVSPERLV
SERFLRFLDHTEISLFAIDEAHCVSQWGHDFRPEYRQLGLLADRYPTIPRIALTATADAE
TRADIKHYLKLENAAEYIASFDRPNIYYQIIEKNNGKKQLLDFLHSRPHGESGIVYCLSR
KKVEDTAAFLNEHGYRALPYHAGLTMTERNENQHRFTREEGLIIVATVAFGMGIDKPDVR
FVAHLDMPQSIEHFYQESGRAGRDGQPAASWLCYGLNDYSLLRERIQTGNSSDFQKQIEQ
QKLEAMFAVCETSSCRRAALLRHFGEEIPPCGHCDNCLHPPVLFNATENVQKLLSCVYRV
GQRFAAGYVIHVLRGKADDWIRQNRHDQLSTYGIGAALSDKEWRGIIRQCIGQGLLATDP
HNYHALMLTQAARPVLQGKQTVMLRPLKREKSATRTPREQWLRTEREERLWQALRQWRTE
RARADNVPAYIVCGDRTLQDIVQQRPASLTELQNIYGLGEAKIQKFGSGILEVCAQFTQD
GDTETALPDA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaccctccgccctcagcatcctgcgcgaagttttcggctatcacgccttccgt
gggcggcaggaagaaattgtgaacgcgctggcagaggggcaaaatctgctggtgctgatg
cctaccggcggcggcaaatccctgtgttatcaaattcccgccctgatgaggcgcgggctg
gccgtggtagtgtcgccgctgattgccctgatggacgaccaagtggccgccctgcaggcc
gcaggcgtggccgccgccagcgtgcacagtggcattggcagcagtcaggtgcagcagatt
gccgacaccatcgaggcaggctacctgaaactgctctacgtttcccccgagcgtttggta
agcgaacgcttcctgcgctttctcgaccacaccgaaatcagcctgttcgccatcgacgaa
gcccactgcgtgagccaatgggggcacgacttccgccccgaataccgccagctcggcctc
ctggccgaccgctaccccaccatcccccgcatcgccctcaccgccaccgccgacgctgaa
acccgtgccgacatcaaacactacctcaagctggaaaacgccgccgaatacatcgccagc
ttcgaccgccccaacatctactaccaaatcatcgaaaaaaacaacggcaaaaagcagctg
ctcgattttctgcacagccgcccccacggcgaaagcggcatcgtttactgcttaagccgc
aaaaaagtggaagacaccgccgcctttttaaacgaacacggctaccgcgccctgccttat
cacgccggcctcaccatgaccgagcgcaacgaaaaccagcaccgcttcacccgcgaagaa
ggcctcatcatcgtagccaccgttgccttcggcatgggcatcgacaaacccgacgtgcgc
ttcgtcgcccacctcgacatgccgcaaagcatcgaacacttctaccaggaaagcggccgc
gccgggcgcgacggccagcccgccgctagttggctgtgctacggcctcaacgactactcc
ctgctgcgcgaacgtatccaaaccggcaacagcagcgacttccaaaagcaaatcgaacag
caaaaactcgaagccatgtttgccgtgtgcgaaacctccagctgccgccgcgccgcccta
ttgcgccacttcggcgaagaaatccccccctgcggccactgcgacaactgcctgcacccg
cccgtcctcttcaacgccaccgaaaacgtgcagaaactcctcagctgcgtttaccgcgtc
ggccagcgctttgccgccggctacgtcatccacgtattgcgcggcaaagccgacgactgg
attcggcaaaaccgccacgaccagctctccacctacggcatcggcgccgccctgtccgac
aaagaatggcgcggcatcatccgccaatgcatcggccaaggcctgctcgccaccgacccg
cacaactaccacgccctcatgctcacccaagccgcccgccccgtgctgcaaggcaagcag
accgtgatgctgcgcccgctcaaacgcgaaaaatccgccacccgcaccccgcgcgaacaa
tggctgcgcaccgagcgcgaagaacgcctctggcaagccctgcgccaatggcgcaccgaa
cgcgcccgtgccgacaatgtgcccgcctacattgtgtgtggcgaccgcaccctgcaagac
atcgtgcaacaacgccccgctagcctcaccgaactgcaaaacatctacggcttgggcgaa
gccaaaatccaaaaattcggcagcggtattcttgaagtctgcgcccaattcactcaagat
ggcgacaccgaaaccgccctgccagatgcctaa
DBGET
integrated database retrieval system
