Eikenella corrodens: SAMEA4412678_1955
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Entry
SAMEA4412678_1955 CDS
T05039
Symbol
yhbJ
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
ecor
Eikenella corrodens
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecor03019
]
SAMEA4412678_1955 (yhbJ)
Messenger RNA biogenesis [BR:
ecor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SAMEA4412678_1955 (yhbJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_33
AAA_18
AAA_22
T2SSE
AAA_16
AAA_28
Motif
Other DBs
NCBI-ProteinID:
SNW10527
UniProt:
A0A8B4GFN9
LinkDB
All DBs
Position
1:1970089..1970946
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AA seq
285 aa
AA seq
DB search
MRIVLISGLTGSGKTVALKLLGDMGFTCVDNIPPALLPQLVAQSAASKISKLAISLDIRL
LYPQDTIQNCLRAIRRQGHPLRLLFLDADTATLIRRLDRHGRRHPLAATTLTLAESIAAE
RQMLQPWQSFAFCINNSHDSIGDLKFRIQEWLALSHGGLQVVIESFGFKYGAPLDLDFLF
DTRALPNPYYDENLRELTGRDEAVRAYFAQFKIVQQMVADISGYLNRWLSEYARQTRVHM
LVVGIGCAGGQHRSVFVAEAVAERLRDYPVWVRHRQLPATAAHRA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaggatagtgctgattagcgggctgaccggctcgggaaaaacagttgccttaaaactg
ctcggtgatatgggcttcacttgcgtggacaatattccgcccgcgctcctgccacaattg
gtggctcaatctgctgccagtaaaatcagcaagctggccatcagcctcgatatccgcctg
ctgtatccccaagacaccatccaaaactgcctgcgtgccatccgccgccaaggccaccca
ctgcgcttgttgtttcttgatgccgacaccgctacccttatccgccggctcgaccgccac
ggccgccgccatcccctcgcagccaccacccttaccttggccgaaagcatagccgccgag
cggcaaatgctccaaccgtggcagagtttcgctttttgcatcaacaactcccacgacagc
atcggcgatttgaaattccgcatccaggagtggttagctctcagccacggcggtttgcag
gtggtgatcgaatcattcggcttcaaatacggcgcaccgttggatttggatttcctgttt
gacacccgtgccttgcccaacccgtattacgatgaaaacttgcgcgaactcaccggccga
gacgaagccgtgcgcgcctatttcgcccaatttaaaatcgtgcagcagatggtagccgac
atcagcggctacctaaaccgctggctatccgaatatgcccgccaaacccgcgtacacatg
ctcgtggtcggcatcggctgcgccggcggtcagcaccgctccgtattcgtggccgaagcc
gtggccgaacgcctgcgtgactaccccgtgtgggtgcgccaccgccagcttcccgccacc
gccgcccaccgcgcgtga
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