Eikenella corrodens: SAMEA4412678_2004
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Entry
SAMEA4412678_2004 CDS
T05039
Symbol
serS
Name
(GenBank) Serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ecor
Eikenella corrodens
Pathway
ecor00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAMEA4412678_2004 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecor01007
]
SAMEA4412678_2004 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecor03016
]
SAMEA4412678_2004 (serS)
Enzymes [BR:
ecor01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
SAMEA4412678_2004 (serS)
Amino acid related enzymes [BR:
ecor01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SAMEA4412678_2004 (serS)
Transfer RNA biogenesis [BR:
ecor03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SAMEA4412678_2004 (serS)
Prokaryotic type
SAMEA4412678_2004 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CEP63
HH_YknX
FBF1
ZapB
CC_Bre1
DUF1664
DUF3887
CCDC89
Motif
Other DBs
NCBI-ProteinID:
SNW10600
UniProt:
A0A8B4GIE6
LinkDB
All DBs
Position
1:2020886..2022178
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AA seq
430 aa
AA seq
DB search
MLDIQLLRTDAAAVAAKLAQRGFVFDSAAFDALEAQRKALQMRTEELQSRRNSVSKQIGA
LKGQGKHAEAEAAMVEVAQIKTDLEQADTDYQAVQAQIDALLLGIPNLPHESVPAGKDET
ENVEVRRVGTPRQFDFEIKDHVDLGEKLGLDFETAAALSGARFSLMKGQVARLHRALAQF
MLDTHTQQHGYTECYTPYIVSDSTLIGTGQLPKFGEDLFHVIRGGDESKTKQYLIPTAEV
TLTNTVRERILPADALPLKLTAHSPCFRSEAGSHGKDTRGLIRQHQFDKVEMVQIAHPDH
SYDALEEMVGHAERILQLLELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREISSCS
NCEDFQARRMKARFKDEDGKNRLVHTLNGSGLAVGRTLVAVLENHQNADGSISIPAALRP
YLGGVDKLVP
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctagatatccaacttctccgtaccgatgccgccgctgtagccgccaaactggcacaa
cgcgggtttgtttttgattctgccgccttcgacgcattggaagctcagcgtaaggctctg
caaatgcgtaccgaagagctgcaatcccgacgcaacagtgtgtccaaacaaatcggtgcg
ctcaaagggcagggcaaacatgccgaagccgaagcagctatggtcgaagtagcacagatc
aaaaccgatttggaacaggctgataccgactaccaagccgtacaggcacaaatcgatgcc
ttgctgctaggtatcccgaatttaccgcacgagagcgtgccagccggcaaagatgaaact
gaaaacgtggaagtgcgccgcgtaggtactccgcgtcaatttgattttgaaatcaaagac
catgtggacttgggcgaaaagctcggcctcgattttgaaactgctgctgctctttccggt
gcccgcttcagcctgatgaaaggccaggttgcccgcctgcaccgtgccttggcgcaattt
atgctcgacacccacacccagcagcacggctacaccgagtgctacaccccttatatcgtc
agcgatagcactctcatcggtactggccagctgcccaaatttggtgaagatttgttccat
gttatccgcggtggtgacgagagcaaaaccaagcagtacctcattcccacagccgaagta
accctgaccaacaccgttcgcgagcgcatcctgccggccgatgccttgcctctcaaactc
accgcccattcaccctgcttccgtagcgaagccggctcgcacggcaaagacacgcgcggc
cttatccgccagcaccaatttgataaggtagaaatggtgcaaattgctcaccccgaccac
tcctacgacgcactggaagaaatggtcggccacgccgagcgcatcttgcaactgctcgaa
ctgccttaccgcgttattactctgtgtaccggcgatatgggcttcggcgccgccaaaacc
tacgatttggaagtgtgggtgcccgcgcaaaatacctatcgcgaaatctccagctgctcc
aactgcgaagatttccaagcccgccgcatgaaagcccgcttcaaagatgaagatggtaaa
aatcgcttggtgcacaccctgaacggctccggcttggcagtaggccgtaccttagtggcg
gtgctggaaaaccaccaaaacgccgatggcagcatcagcatccctgctgccttgcgcccc
tatttgggcggcgtggacaaactcgtcccctaa
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