Eikenella corrodens: SAMEA4412678_2032
Help
Entry
SAMEA4412678_2032 CDS
T05039
Symbol
hupB
Name
(GenBank) NS1
KO
K03530
DNA-binding protein HU-beta
Organism
ecor
Eikenella corrodens
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecor03032
]
SAMEA4412678_2032 (hupB)
03036 Chromosome and associated proteins [BR:
ecor03036
]
SAMEA4412678_2032 (hupB)
03400 DNA repair and recombination proteins [BR:
ecor03400
]
SAMEA4412678_2032 (hupB)
DNA replication proteins [BR:
ecor03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SAMEA4412678_2032 (hupB)
Chromosome and associated proteins [BR:
ecor03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SAMEA4412678_2032 (hupB)
DNA repair and recombination proteins [BR:
ecor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SAMEA4412678_2032 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
UBA_HYPK
Arteri_nsp7a
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
SNW10628
UniProt:
A0A1A9RI21
LinkDB
All DBs
Position
1:2049302..2049571
Genome browser
AA seq
89 aa
AA seq
DB search
MNKSELIEAIAKEADISKAAAGKALDGFTKAVTTALKKGDTVTLVGFGTFYVGERAERKG
RNPQTGKELIIPAAKSPKFRAGKALKDAL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtctgaattgattgaagcgattgctaaggaagctgacatttccaaggctgct
gccggcaaggcactggatggttttaccaaggctgttaccaccgctctgaaaaaaggcgac
accgtaactctggttggcttcggcactttctacgtgggcgaacgcgccgaacgcaaaggc
cgcaacccgcaaaccggtaaagaactgattattccggctgccaaatctccgaaattccgt
gcaggtaaagcgttgaaagatgcgctgtaa
DBGET
integrated database retrieval system
