Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_0535
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Entry
EC958_0535 CDS
T04373
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecos03400
]
EC958_0535 (sbcC)
DNA repair and recombination proteins [BR:
ecos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EC958_0535 (sbcC)
Archaeal homologous recombinant proteins
EC958_0535 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
RsgA_GTPase
cobW
nSTAND3
AAA_21
NTPase_1
AAA_22
AAA_14
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
CDN80786
UniProt:
A0AA36P4S2
LinkDB
All DBs
Position
complement(442051..445194)
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LSNVSQSQNDLMTRDTAECLAEVEFEVKDEAYRAFWSQNRARNQPDGNLQVPRVELARCA
DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQVQSLTASLQVLTDEEKQLITAQQ
QEQQSLNWLTRLDELQQEASRRQQALQQALAEEEQAQPQLAALSLAQPARNLRPHWERIA
EHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRFRQ
WNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVASAQAQHAE
QRPLRQRLVALHGQIVPQQKRLAQLQVAIQNVTLEQTQRNAALNKMRHRYKEKMQQLADV
KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQARLLTLEKEVK
KLGEEGATLRGQLDALTKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPQDDIQP
WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQE
DEEESWLATRQQEAQSWQQRQNELTALQNRMQQLTPILETLPQSDELPHSEETVALENWR
QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT
QLEQLKQNLENQRRQAQTLVTQTAETLTQHQQHRPGGLSLTVTVEQIQQELAQTHQKLRE
NTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQG
LTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLESAFAVK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaaaaacctgaactcattaaaaggcgaatggaagatt
gatttcacccgcgagccgttcgccagcaacgggctgtttgctattaccggcccaaccggt
gcggggaaaaccaccctgctggacgccatttgtctggcgctgtatcacgaaactccgcgc
ctctctaacgtttcacaatcgcaaaatgatctcatgacccgcgataccgccgaatgtctg
gcggaagtggagtttgaagtcaaagatgaagcgtatcgcgcgttctggagccagaatcgg
gcgcgtaaccagccggacggtaatttgcaggtgccacgcgtagagctggcgcgctgtgca
gacggcaaaattctcgccgacaaagtgaaagataagctggaactgacggcgacgttaacc
ggactggattacgggcgcttcacccgttcgatgctgctttcgcaggggcaatttgctgcc
ttcctgaatgccaaacccaaagaacgcgcagaattgctcgaggagttaaccggcactgaa
atctacgggcaaatctcggcgatggtttttgagcagcacaaatcggcccgcacagagctg
gagaagctgcaagcgcaggccagcggcgtcgcgttgctcacgccggaacaagtgcaatcg
ctgacagcgagtttgcaggtacttactgacgaagaaaaacagttaattaccgcgcagcag
caagaacaacaatcgctaaactggttaacgcgtctggacgaattgcagcaagaagccagc
cgccgtcaacaggccttgcaacaggcattagccgaagaagaacaagcgcaacctcaactg
gcggcgctcagtctggcacaaccggcacgaaatcttcgtccgcactgggaacgcatcgca
gaacacagcacggcgctggcgcatactcgccagcagattgaagaagtaaatactcgctta
cagagcacaatggcgcttcgtgcgagcattcgccaccacgcggcgaagcagtcagcagaa
ttacagcagcagcaacaaagcctgaatgcctggttacaggaacacgaccgcttccgtcag
tggaacaacgaactggcgggttggcgtgcgcagttctcccaacaaaccagcgatcgcgag
catctgcggcaatggcagcaacagttaacccatgctgagcaaaaacttaatgcgcttgcg
gcgatcacgttgacgttaaccgccgatgaagttgctagcgcccaggcgcaacatgctgag
caacgcccactgcgtcagcgcctggtcgcactgcatgggcagattgttccccaacaaaaa
cgtctggcgcagttacaggtcgctatccagaacgtcactctggagcagacgcaacgtaat
gccgcacttaacaaaatgcgccatcgttataaagaaaagatgcaacaacttgccgatgtg
aaaaccatttgcgagcaggaagcgcgcattaaaacgctggaagcccagcgcgcacagtta
caggcgggtcagccttgcccactttgtggttccaccagccacccggcggtcgaggcgtat
caggcgctggaaccgggcgttaatcaggcccggctattaacgctggaaaaagaagtgaaa
aagctcggcgaagaaggtgcgacgctacgtgggcaactggacgccttaacaaagcaactt
cagcgcgatgaaaacgaagcgcaaagcctccgacaagatgagcaagcacttactcaacaa
tggcaagccgtcacggccagcctcaatatcaccctgcagccacaggacgatattcaaccg
tggctggatgcacaagatgagcacgaacgccagctgcggttactcagccaacggcatgaa
ttacaagggcagattgccgcgcataatcagcaaattatccagtatcaacagcaaattgaa
caacgccagcagcagctcttaacggcattggcgggttatgcactgacattgccacaggaa
gatgaagaagagagctggttggcgacgcgtcagcaagaagcgcagagctggcagcaacgc
cagaacgaattaaccgcgctgcaaaaccgtatgcagcagctgacgccgattctggaaacg
ttgccgcaaagtgatgaactcccgcacagcgaagaaactgtggcgctggaaaactggcgg
caggttcatgaacaatgtctcgcattacacagccagcagcagacgttacagcaacaggat
gttctggcggcgcaaagtctgcaaaaagcccaggcgcagtttgacaccgcgctacaggcg
agcgtctttgacgatcagcaggcgttccttgcggcgctaatggatgaacaaacactaacg
cagctggaacagctcaagcagaatctggaaaaccagcgccgtcaggcgcaaacgctggtc
actcagacagcagaaacgctgacacagcatcagcaacaccgacctggcgggttgtctctc
actgtgacggtggagcagattcagcaagagttagcgcaaactcaccaaaagttgcgtgaa
aacaccacgagtcaaggcgagattcgccagcagctgaagcaggatgcagataaccgtcag
caacaacaaaccttaatgcagcaaattgctcaaatgacgcagcaggttgaggactgggga
tatctgaattcgctaataggttccaaagagggcgataaattccgcaaatttgcccaaggg
ctgacgctggataatttagtccatctcgctaatcagcaacttacccggctgcacgggcgc
tatctgttacagcgcaaagccagcgaggcgctggaagttgaggttgttgatacctggcag
gctgatgcggtacgcgatacccgtaccctttccggcggcgaaagtttcctcgtcagtctg
gcgctggcactggcgctttcagatctggtcagccataaaacgcgtattgactcgctgttc
cttgatgaaggttttggcacgctggatagcgaaacgctggataccgcccttgatgcgttg
gatgccctgaatgccagtggcaaaaccatcggggtgattagccacgttgaagcgatgaaa
gagcgtattccggtgcagatcaaagtgaagaagatcaatggactgggctacagcaaactg
gaaagtgcgtttgcagtgaaataa
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integrated database retrieval system
