Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_1122
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Entry
EC958_1122 CDS
T04373
Symbol
himD
Name
(GenBank) beta subunit of IHF transcriptional dual regulator
KO
K05788
integration host factor subunit beta
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecos03032
]
EC958_1122 (himD)
03036 Chromosome and associated proteins [BR:
ecos03036
]
EC958_1122 (himD)
03400 DNA repair and recombination proteins [BR:
ecos03400
]
EC958_1122 (himD)
DNA replication proteins [BR:
ecos03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EC958_1122 (himD)
Chromosome and associated proteins [BR:
ecos03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EC958_1122 (himD)
DNA repair and recombination proteins [BR:
ecos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EC958_1122 (himD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_euk_1
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
CDN81385
UniProt:
A0AA36P5Q8
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All DBs
Position
1045445..1045729
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AA seq
94 aa
AA seq
DB search
MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaattgatagaaagacttgccacccagcaatcgcacattcccgccaag
acggttgaagatgcagtaaaagagatgctggagcatatggcctcgactcttgcgcagggc
gagcgtattgaaatccgcggtttcggcagtttctctttgcactaccgcgcaccacgtacc
ggacgtaatccgaagactggcgataaagtagaactggaaggaaaatacgttcctcacttt
aaaccaggtaaagaactgcgcgatcgcgccaatatttacggttaa
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