Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_1136
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Entry
EC958_1136 CDS
T04373
Symbol
ycbB
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecos01002
]
EC958_1136 (ycbB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecos01011
]
EC958_1136 (ycbB)
Peptidases and inhibitors [BR:
ecos01002
]
Cysteine peptidases
Family C82
EC958_1136 (ycbB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ecos01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
EC958_1136 (ycbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
DUF4389
Motif
Other DBs
NCBI-ProteinID:
CDN81398
UniProt:
A0AA36KW24
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Position
1062662..1064509
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AA seq
615 aa
AA seq
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MLLNMMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAVSEQGEALPQAQATAIM
AGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQL
AEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGYLHFIANIPVKGTRWLYSSKP
YALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYAAMHESLLALLSDTKPWPQLTGK
ATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKLMD
KQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLA
LNIQRLRLLPTELSTGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVV
VNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLP
FRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANM
LLQDAGWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPA
RSSSQIVSKAEQLIR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaatatgatgtgtggtcgtcggctgtcggcaatcagtttgtgcctggccgta
acattcgctccactgttcaatgcgcaggccgatgagcctgaagtaatccctggcgacagc
ccggtggctgtcagtgaacagggcgaggcactgccgcaggcgcaagccacggcaataatg
gcggggatccagccattgcctgaaggtgcggctgaaaaagcccgcacgcaaatcgaatct
caattacccgcaggttataagccggtttatcttaaccagcttcaattgttgtatgccgca
cgcgatatgcaacccatgtgggaaaaccgtgatgctgttaaagccttccagcaacagctg
gcagaggtggcgattgccggtttccagccgcagtttaataaatgggtagagttactgacc
gatcctggtgttaacgggatggcacgcgacgtggtgctctctgatgcgatgatgggctat
ctccatttcattgcaaatattccggtcaaaggcactcgctggctatatagcagtaaacct
tatgcgcttgcaacgccgccgctttcggtgattaaccaatggcagctggcgctggataaa
ggtcaattgccgacgtttgttgcaggactggcaccgcagcatccgcaatatgcggcgatg
catgaatcgttactggccttactcagtgacaccaaaccgtggcctcaactgaccggtaaa
gcaacgttgcgcccaggacagtggagtaacgacgtaccggcgttgcgcgaaatattgcaa
cgtacaggcatgttggacgggggaccgaaaattacgctacctggcgatgacacgccaact
gacgcggtagtcagcccatcggctgttactgttgaaacagcagaaactaagctgatggac
aaacaaactacgtctcgtagtaaacctgcgcctgccgttcgcgccgcctacgataatgaa
ctggtggaagccgttaaacgttttcaggcatggcaaggattgggagcagatggtgctatt
ggcccggcaacgcgtgactggttaaacgtaacgcccgcccagcgtgctggcgtgttggca
ctcaacatccagcgattgcgcttgctgccaacagagctttctaccgggatcatggttaac
attccagcctattcgctggtctactatcagaacggcaatcaggtgctggattcgcgagtc
attgtcggtcgccccgatcgcaaaacgccgatgatgagcagtgcacttaacaacgtagtg
gtaaacccgccgtggaacgtaccaccaactctggcacgcaaagatattctgccgaaagtg
cgcaacgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaacagc
agagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccg
ttccgtttccagcaggctccaggcccacggaactcgctggggcgctataaattcaatatg
ccgagttcagaggccatttatttgcatgacacgccgaaccacaatctgttcaaacgtgat
acacgcgcattgagctcaggctgtgtacgagtgaataaagcttccgatctggcgaatatg
ctgttgcaggatgcaggatggaatgacaaacgtatttctgatgcgctgaagcagggcgat
acgcgttacgtcaatattcggcagtcgattccggtgaatctctactatctgacggccttt
gttggtgctgatggtcgtacccagtatcgtacagatatttacaattatgatctgcctgcg
cgatccagctcgcaaattgtatcgaaagcggaacaattaatcaggtaa
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