Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_1210
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Entry
EC958_1210 CDS
T04373
Symbol
ycdC
Name
(GenBank) hypothetical transcriptional regulator YcdC
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecos03000
]
EC958_1210 (ycdC)
Transcription factors [BR:
ecos03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
EC958_1210 (ycdC)
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
CDN81472
UniProt:
A0AA36KWP1
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Position
1138114..1138779
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AA seq
221 aa
AA seq
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MPIYKRGERMTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVS
KTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQA
SRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQ
HYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
ttgccaatctacaagaggggagagcgcatgacgcaaggcgcagtgaaaacaacgggtaaa
cgttcgcgcgcagtgagcgcgaagaaaaaagcgattcttagcgcagcactggacactttt
tcacaattcggttttcacggcacaaggctggagcagatcgcggagttggcgggtgtttca
aaaaccaatctgctgtattactttccgtcaaaagaggcgctgtatatagccgtactgcgg
cagattctcgatatctggctggcaccgttaaaagcgtttcgagaagatttcgccccgctg
gcggcgatcaaagagtacatccgtctgaagctggaagtttcccgcgattatccgcaggct
tcgcgcctgttctgtatggagatgctggcaggtgcaccgctgttaatggatgaactgacg
ggcgatttgaaggcattaattgatgagaaatcggcgctgattgccggttgggttaaaagc
ggcaaactcgcgccgattgatccgcagcatttgatttttatgatttgggcttccactcaa
cattacgccgattttgcccctcaggtggaggcggtgacaggcgcgacgttgcgcgatgag
gtatttttcaatcaaacggttgaaaacgtgcagcggattattattgaggggattcgacca
cgctaa
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