Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_1221
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Entry
EC958_1221 CDS
T04373
Symbol
ycdR
Name
(GenBank) hypothetical lipoprotein YcdR
KO
K11931
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Pathway
ecos02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
EC958_1221 (ycdR)
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GFIT
Motif
Pfam:
GHL13
Polysacc_deac_1
GHL10
A-sol_ELP1
Motif
Other DBs
NCBI-ProteinID:
CDN81483
UniProt:
A0AA36KWE9
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All DBs
Position
complement(1151422..1153440)
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AA seq
672 aa
AA seq
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MLRNGNKYLLMLVSIIMLTACISQSRTSFIPPQDRESLLAEQPWPHNGFVVISWHNVEDE
AADQRFMSVRTSALREQFAWLRENGYQPVSIAQIREAHRGGKPLPEKAVVLTFDDGYQSF
YTRVFPILQAFQWPAVWAPVGSWVDTPADKQVKFGDEMVSREYFATWQQVREVARSRLVE
VASHTWDSHYGIQANATGSLLPAYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTK
AEVNPHVFVWPYGEANGIAIAELKKLGYDMFFTLESGLANASQLDSIPRVLIANNPSLKE
FAQQIITVQEKPLQRVMHIDLDYVYDENRQQMDRNIDVLIQRVKDMQISTVYLQAFADPD
GDGLVKEVWFPNRLLPMKADIFSRVAWQLRTRSGVNIYAWMPVLSWDLDPTLTRVKYLPT
GEKKAQIHPEQYRRLSPFDDRVRAQVGMLYDDLAGHAAFDGILFHDDALLSDYEDASAAA
IAAYQQAGFSGSLSEIRQNPEQFKQWTRFKSRALADFTLELSARVKAIRGPHVKTARNIF
ALPVIQPESEAWFAQNYADFLKSYDWTAIMAMPYMEGVTEKSADQWLIQLTNQMKSIPQA
KDKSILELQAQNWQKNGQHQAISSQQLAHWMSLLQLNGVKNYGYYPDNFLHNQPEIDVIR
PEFSTAWYPKND
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtaatggaaataaatatctcctgatgctggtgagtataattatgctcaccgcg
tgcattagccagtcaagaacatcatttataccgccacaggatcgcgaatctttactcgcc
gagcaaccgtggccacataatggttttgtggtgatttcatggcataacgttgaagacgaa
gctgccgaccagcgttttatgtcagtgcgaacatcagcactgcgtgaacaatttgcctgg
ctgcgcgagaacggttatcaaccggtcagtattgctcaaattcgtgaagcacatcgagga
ggaaaaccgctaccggaaaaagcagtagtgctgacttttgatgacggctaccagagtttt
tatacccgtgtcttcccaattcttcaggccttccagtggccggctgtatgggctcccgtc
ggcagttgggtcgatactccagcggataaacaagtgaaatttggcgatgagatggtcagt
cgagaatattttgccacgtggcaacaagtgcgagaagttgcgcgttcccggctcgttgag
gtcgcttctcatacatgggattctcactacggtattcaggctaatgccaccggcagctta
ttgcctgcatatgtaaatcgtgcatattttactgaccacgcacggtatgaaaccgcagca
gaataccgggaaagaattcgcctggatgctgtaaaaatgacggaatacctgcgtacaaag
gctgaggtaaatccacacgtttttgtttggccttatggcgaagcgaatggcatagcaata
gcggaattaaaaaaactcggttatgacatgttcttcacccttgaatcaggtttggcaaat
gcgtcgcaattagattccattccgcgagtattaatcgccaataatccctcattaaaagag
tttgcccagcaaattattaccgtacaggaaaaaccactacaacgggtaatgcatatcgat
cttgattacgtttatgacgaaaaccgccagcaaatggatcgcaatattgatgtgctaatt
cagcgggtaaaagatatgcaaatatctaccgtgtatttgcaagcatttgctgatcccgat
ggtgatgggctggttaaagaggtctggtttccaaatcgtttgctaccaatgaaagcagat
atttttagtcgggttgcctggcaattgcgtacccgctcaggtgtaaacatctatgcgtgg
atgccggtattaagctgggatttagatcccacattaacgcgagtaaaatacttaccaact
ggggagaaaaaagcacaaattcatcctgaacaataccgccgtctctctcctttcgatgac
agggtcagagcacaagttggtatgttatatgatgatcttgccggacatgctgcttttgat
ggcatattgttccacgatgatgctttgctttcagattatgaagatgccagtgcagcggct
atcgcggcttatcagcaagctggctttagcgggagtctgagcgaaattcgacaaaacccg
gagcaatttaaacagtggacccgctttaaaagtcgtgcgttagctgacttcactttagaa
cttagtgcgcgcgtaaaagccattcgtggtccacatgttaaaactgcacgaaatattttt
gcacttccggtaatacaacctgaaagtgaagcctggtttgcacagaattatgctgatttc
ctaaaaagctatgactggaccgctattatggctatgccttatatggaaggcgtcacagaa
aaatcggctgatcaatggttaatacaattgaccaatcagatgaaaagcatcccgcaggct
aaagacaaatcaattttagaattacaggcacaaaactggcagaaaaatggtcagcatcag
gctatttcttcacaacaactcgctcactggatgagcctattacaactgaatggagtgaaa
aattatggttattatcccgacaattttctgcataaccaacctgaaatagacgttattcgt
cctgagttttcaacagcctggtatccgaaaaatgattaa
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