Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_1619
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Entry
EC958_1619 CDS
T04373
Symbol
yciR
Name
(GenBank) hypothetical protein
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Pathway
ecos02024
Quorum sensing
ecos02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EC958_1619 (yciR)
02026 Biofilm formation - Escherichia coli
EC958_1619 (yciR)
Enzymes [BR:
ecos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
EC958_1619 (yciR)
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GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
CDN81900
UniProt:
A0AA36KWZ1
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Position
complement(1520789..1522774)
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AA seq
661 aa
AA seq
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MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTEITEPDRILQLSAEQAARIREMTVI
TSSLMMSLTVDESDLSVHLVGRKINKREWGGNASAWHDTPAVARDLSHGLSFAEQVVSEA
HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG
NAYEVELWIPTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD
SITGLPNRNAMQELIDHAINQADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI
LSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI
SLSPEHGSDSAAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND
QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV
RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND
ELALSVIQQFSRLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR
A
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgttagggagtccacaacgttgtacaactttctcggatcgcacaatccatac
tggcggttgacggaaagcagcgatgttttgcgcttttctaccaccgaaatcacagaaccc
gatcgtattttgcaactatctgccgaacaggctgctcgcatcagggaaatgacggtcatc
acctccagcctgatgatgagtctgaccgtcgatgaaagcgatctttctgtgcatctggta
ggacgaaaaatcaataaacgagaatggggaggcaacgcgtctgcatggcatgacacaccg
gcggttgctcgtgatttatcacatgggctttcctttgctgagcaggtagtttctgaagca
cattccgcaatagtgattctcgacagccgggggaatatccagcgctttaatcggttatgt
gaagattacacaggcttgaaagaacacgacgtcattgggcaaagcgtgtttaaactgttt
atgagtcgtcgtgaagctgcggcatccaggcgcaataaccgtgtattttttcgaagcggc
aatgcatatgaagtcgaactgtggataccaacacgtaaaggccagcggctgtttctgttt
cgcaataaatttgtccacagcggcagtggcaaaaacgagatttttttaatctgttccggc
accgacattaccgaagagcgccgcgctcaggagcgactgcgtattctggcaaataccgac
agtatcaccggactgccgaatcgtaacgcaatgcaggagttaatcgatcacgctattaat
caggcagataacaataaagttggggttgtgtatcttgatttggataattttaaaaaggtc
aacgacgcctatgggcatttgtttggtgaccagttattacgcgacgtgtcattggctatt
ttaagctgtctcgaacatgaccaggtattggcgcgtccaggtggcgatgagtttctggta
ctggcatccaatacctcacaaagcgcgctggaagcaatggcatcacgaattttgacccgc
ttacggctcccctttcgcattggtttaattgaagtttataccagctgttcagtaggtatt
tcactctctcccgaacatggttcggacagcgcggctattattcgtcacgccgacacagca
atgtacacagcgaaggaaggcggacgaggacaattttgcgtttttaccccagaaatgaat
cagagggtatttgaatatctctggctggataccaacttgcgtaaagcactggaaaacgat
cagttggttattcactatcaaccgaaaatcacctggcgtggtgaagtgcgcagtctggaa
gcactagtacgttggcagtcacctgaacgtgggttgattccaccgttggacttcatttcc
tacgccgaagaatcagggctaattgtgcctttaggccgttgggtgattctcgatgtcgta
cgccaggtagcgaagtggcgggataaaggcattaacctgcgagtagcggtaaatatttct
gcacgtcagctcgccgatcaaaccattttcaccgccctgaaacaggttctccaggaactc
aattttgaatactgccctatagatgttgaactgacggagagctgcctgattgagaatgat
gaactggcactgtctgttattcaacaatttagccgattaggtgcgcaagttcatctggac
gattttggtaccggctactcttcactttcgcaactggcgcgctttccgatcgatgccatc
aaacttgaccaggtttttgttcgggatattcacaaacagcctgtctcgcaatcactggtc
cgggcgatcgtcgctgtggcccaggcattgaatcttcaggtgatcgccgaaggtgtagaa
agtgcaaaggaagatgcttttttaaccaagaacgggatcaatgagcgacaaggatttttg
tttgccaaaccgatgcccgccgtcgccttcgaacgctggtataaacgctatctgaagcgc
gcataa
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