Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_2873
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Entry
EC958_2873 CDS
T04373
Name
(GenBank) RNase III, ds RNA
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Pathway
ecos03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EC958_2873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecos03019
]
EC958_2873
03009 Ribosome biogenesis [BR:
ecos03009
]
EC958_2873
03036 Chromosome and associated proteins [BR:
ecos03036
]
EC958_2873
Enzymes [BR:
ecos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EC958_2873
Messenger RNA biogenesis [BR:
ecos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EC958_2873
Ribosome biogenesis [BR:
ecos03009
]
Eukaryotic type
90S particles
RNase
EC958_2873
Prokaryotic type
rRNA processing factors
EC958_2873
Chromosome and associated proteins [BR:
ecos03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EC958_2873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
CDN83210
UniProt:
A0AA36L055
LinkDB
All DBs
Position
complement(2875039..2875719)
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AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttaatcatcag
gaactgttgcagcaggcattaactcatcgtagtgccagcagtaaacataacgagcgtctg
gaatttttaggtgactctattctgagctacgttatcgccaatgcgctttatcaccgtttc
cctcgtgtggatgaaggcgatatgagccggatgcgcgccacgctggtccgtggtaatacg
ctggctgaactggcgcgcgaatttgagttaggtgagtgcttacgtttagggccaggtgaa
cttaaaagcggtggatttcgtcgtgagtcaattctcgccgacaccgtcgaagcattaatt
ggtggcgtattcctcgacagtgatattcaaaccgtcgagaaattaatcctcaactggtat
caaactcgtctggacgaaattagcccaggcgataaacaaaaagatccgaaaacgcgtctg
caggaatatttgcagggtcgccatctgccgctgccaacttatctggtagtccaggtacgt
ggcgaagcgcacgatcaggaatttactatccactgccaggtcagcggcctgagtgaaccg
gtggttggcacaggttcaagccgtcgtaaggctgagcaggctgccgccgaacaggcgttg
aaaaaactggagctggaatga
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