Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_3017
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Entry
EC958_3017 CDS
T04373
Symbol
ygbB
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Pathway
ecos00900
Terpenoid backbone biosynthesis
ecos01100
Metabolic pathways
ecos01110
Biosynthesis of secondary metabolites
Module
ecos_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
EC958_3017 (ygbB)
Enzymes [BR:
ecos01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
EC958_3017 (ygbB)
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Paralog
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Motif
Pfam:
YgbB
DUF6630
Motif
Other DBs
NCBI-ProteinID:
CDN83351
UniProt:
A0AA36P7V0
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All DBs
Position
complement(3012107..3012586)
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AA seq
159 aa
AA seq
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MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKL
FPDTDPAFKGADSRELLREAWRRIQAKGYALGNVDVTIIAQAPKMLPHIPQMRVFIAEDL
GCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattggacacggttttgacgtacacgcctttggcggtgaaggcccaattatcatt
ggtggcgtacgcattccttacgaaaaagggctgctggcgcattctgatggcgacgtggcg
ctgcatgcgttgaccgatgcattgcttggcgcggcggcgctgggagatataggcaagctg
ttcccggataccgatccggcatttaaaggtgccgacagccgcgagctgttgcgcgaagcc
tggcgtcgtattcaggcgaaaggttatgccctcggcaacgtcgatgtcactatcatcgct
caggcaccgaagatgttgccgcacattccacaaatgcgcgtgtttattgccgaagatctc
ggctgccatatggatgatgttaacgtgaaagccactactacggaaaaactgggatttacc
ggacgtggggaagggattgcctgtgaagcggtggcgctactcattaaggcaacaaaatga
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