Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_3052
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Entry
EC958_3052 CDS
T04373
Symbol
ygcA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecos03009
]
EC958_3052 (ygcA)
Enzymes [BR:
ecos01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
EC958_3052 (ygcA)
Ribosome biogenesis [BR:
ecos03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EC958_3052 (ygcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
PCMT
RrnaAD
TRM5-TYW2_MTfase
Methyltransf_11
MTS
Methyltransf_15
Cons_hypoth95
Methyltransf_23
Methyltr_RsmB-F
Methyltransf_4
FtsJ
Ubie_methyltran
Methyltrans_SAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
CDN83387
UniProt:
A0AA36KZR5
LinkDB
All DBs
Position
complement(3049806..3051107)
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AA seq
433 aa
AA seq
DB search
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQ
YARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVI
ADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPQLEALLPKVRACL
GSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLECFSHSEGLDLYLAPDSEILE
TVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVEPEDRVLDLFCGMGNF
TLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKV
LLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHT
GHLESMVLFSRVK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacgacgcacgacgacgcgtcagatcataaccgtttca
gtcaacgacctcgactcttttggtcagggtgtggcgcgacataacggcaaaacattattt
atccccggattattgccgcaggaaaacgcggaagttactgttactgaagataaaaaacag
tatgcccgcgctaaagtcgtacgccggttaagcgatagcccggaacgcgaaacgccacgc
tgtcctcattttggcgtatgcggcggctgtcagcaacaacacgccagcgtggatttacag
cagcgaagcaaaagtgcggcactcgcccgattaatgaaacacgaagtctctgaagtgatc
gccgatgttccttggggctatcgccgtcgcgcgcgtttaagtctgaactacttaccgaaa
acacagcaacttcagatggggtttcgcaaagcgggctccagtgacattgtcgacgttaaa
caatgccccattttagtgccccaactagaagcattgctgcccaaagtcagggcatgcctg
ggcagcttacaagctatgcgccatcttggtcatgttgaactggtacaggcaaccagcggc
acgctaatgattttgcgccataccgcaccgctaagttcggcagatcgcgaaaaactggaa
tgcttttcgcattctgaaggcctggatctgtatctcgcccccgatagtgagatactcgaa
accgtctctggtgagatgccctggtatgactcaaatgggttgcgcttaacttttagcccg
cgcgattttattcaggtcaatgcgggtgtgaaccaaaaaatggtagcgcgtgcgttggaa
tggctggatgtggaacctgaagatcgcgtactggatctgttctgcggtatgggcaacttt
acactgccattggcgacacaagctgccagtgtggtcggtgtagaaggtgttccggcgctg
gtggaaaaaggccagcagaatgcgcgtcttaatggcttacagaatgtgacgttttatcac
gaaaatcttgaagaagatgtcacaaagcagccgtgggcgaaaaacggcttcgataaagtg
ttgttggacccggcgcgagcaggtgccgcaggtgttatgcagcaaattataaaactggaa
cctattcgtatagtttatgtatcctgtaaccctgcaacgctggctcgggatagcgaagcg
ttattaaaagcaggatataccattgcgcgactggcgatgctggatatgttcccacacacg
ggacatctggaatcgatggtacttttctcgcgcgttaaatag
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