Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_3120
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Entry
EC958_3120 CDS
T04373
Symbol
recB
Name
(GenBank) protease III
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Pathway
ecos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EC958_3120 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecos03400
]
EC958_3120 (recB)
Enzymes [BR:
ecos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EC958_3120 (recB)
DNA repair and recombination proteins [BR:
ecos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EC958_3120 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
BscB_a-b
Cas_Cas2CT1978
Motif
Other DBs
NCBI-ProteinID:
CDN83458
UniProt:
A0AA36KZV8
LinkDB
All DBs
Position
complement(3135837..3139388)
Genome browser
AA seq
1183 aa
AA seq
DB search
MKRMSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVE
ELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYKRLLEEIDDKAQAAQWLLLA
ERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPR
EIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETLASRHAQIVARIDAVKQQWR
DAVGELDALIESSGIDRRKFNRSNQAKWIEKISAWAEEETNSYQLPESLEKFSQRFLEDR
TKAGGETPRHPLFEAIDQLLAEPLSIRDLVITRALAEIRETVAREKRRRGELGFDDMLSR
LDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETALLLIGDPKQ
AIYAFRGADIFTYMKARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIP
VKSAGKNQALRFVFKGEMQPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGE
ALLMNGDDARPVRASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQEML
WLLQAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDAVVEEFDGYRQIWRKRGV
MPMLRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILE
PDSNASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAV
LDLNAAPESVDLAEAERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSA
LGRLLQKGEPQDVAGLRTCIEALCDDDIAWQTAQIGDNQPWQVNDALTAELNARTLQRLP
GDNWRVTSYSGLQQRGHGIAQDLMPRLDVDAAGVVSVVEVPTLTPHQFPRGASPGTFLHS
LFEDLDFTQPVDPNWVQEKLELGGFEPQWEPVLTEWITAVLLAPLNETGISLSQLSDRDK
QVEMEFYLPISEPLIASQLDALIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYY
LLDYKSNWLGEDSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYERHFGG
VIYLFLRGVDKEHPQQGIYATRPNAGLIDLMDEMFAGMTLEEA
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagaatgagtgatgtcgccgagacactagatcctttgcgcttgcccttacagggc
gagcgcctgattgaagcctctgccggcacaggcaaaacctttacgattgcggcgctctat
ttgcgcctgttacttggactaggcggttcggccgcctttccccgcccgctgaccgttgaa
gaactgctggtggtgacctttaccgaggctgccacggcagaattgcgtggtcgtatccgt
agcaatatccacgagttgcgcatcgcctgtctgcgtgaaaccaccgacaatccactgtac
aaacgcctgctggaagagatcgacgataaagcgcaagccgcgcagtggttgttgttagcc
gagcggcagatggatgaagcggcagtctttactatccacggcttttgccagcgcatgctc
aacctgaatgcctttgaatccggcatgctgtttgagcagcagctgattgaagatgagtct
ctgctacgctaccaggcctgcgccgatttctggcgtcgccactgctacccgctgccgcgt
gaaattgcccaggtcgtctttgaaacctggaaagggccgcaggcgttgctgcgcgatatt
aatcgttatctgcaaggcgaagcgccagttatcaaagcaccgccccccgatgatgaaacg
ctggcttcccgccacgcgcaaattgtggcgcgtattgatgccgtaaaacagcagtggcgc
gacgcagtgggtgaactggatgcgctgatcgaatcttctggtattgatcgacgcaagttt
aaccgtagcaatcaggctaaatggatcgagaagatcagcgcctgggcagaagaagagacc
aatagctatcagttgccggagtcgctggaaaaattctctcagcgtttcttagaagatcgc
acgaaagccgggggggaaaccccgcgacatccactgtttgaggcgatcgatcaactgctt
gcagaaccattgtcgatccgcgatctggtgatcacccgcgcattggctgagatccgcgaa
acagtagcgcgtgaaaaacgccgccgtggcgaattgggttttgatgacatgttaagtcgg
ctcgattccgcgctgcgtagtgaaagcggcgaggtattggcagcggcgatccgtacgcga
ttcccggtggcaatgatcgatgaatttcaggataccgacccccagcagtaccgaattttt
cgccgtatctggcaccatcagccggaaaccgcattgttgctgattggcgacccgaaacag
gccatatatgcattccggggtgcggatatcttcacttatatgaaggcgcgtagcgaagtt
catgctcactacaccttagataccaactggcgttccgcaccgggaatggtgaacagcgtt
aacaaacttttcagccagactgatgacgcgttcatgtttcgtgaaataccgtttattcct
gtgaaatctgccgggaaaaatcaggcgttacgctttgtgtttaaaggtgaaatgcagcct
gcgatgaaaatgtggctgatggaaggcgaaagctgcggcgttggcgactatcaaagtacc
atggcgcaggtatgtgctgcgcaaatccgcgactggctacaagccggacagcggggcgaa
gcgttgctgatgaacggcgacgatgcgcgtccggtgcgtgcttcggacatcagtgtgctg
gtgcgcagccgccaggaggccgctcaggtgcgcgatgccttaacgctgctggaaatccct
tccgtttacctttcgaaccgcgacagtgtttttgaaactctggaagcacaggagatgctt
tggctgttgcaggcggtgatgacgcccgaacgtgagaacaccctgcgcagtgcgctggca
acgtcaatgatggggctgaatgcgctggatattgaaacgctgaataatgacgaacatgcg
tgggatgcggtagtcgaagagttcgatggttatcggcaaatctggcgcaaacgtggcgtt
atgccgatgctgcgggcgctgatgtcggcgcgtaacattgcagaaaacttgctggcaacg
gcaggcggtgagcggcgtcttaccgatatcttgcatatcagcgaactgctacaagaagcc
ggaacgcagctggaaagtgaacatgcgctggtacgctggttatcgcaacatatcctcgag
ccagacagtaatgcctccagccaacaaatgcgcctcgaaagtgataaacatctggtgcag
attgtcacgatacacaaatcaaaagggctggaatatccgctggtctggttgccatttatt
accaatttccgcgtccaggatcaggcgttttatcacgatcgccactcgtttgaggccgtt
ctggatcttaatgctgcgccagaaagcgtcgacctcgcggaggccgaacgtctggcggaa
gatctgcgtttactttacgtggcgctgacgcgttcggtttggcattgcagtctcggcgtt
gcaccgctggtgcgccgtcgtggcgataaaaaaggtgataccgacgtccaccaaagtgcg
ctcgggcgtttgctgcaaaaaggagaaccgcaagatgtggcagggcttcgtacctgcatt
gaagcgttgtgcgatgatgatattgcctggcaaacggcacaaattggtgataaccagccc
tggcaggttaatgatgcattaactgcagaactgaatgcgaggacgctacaacgattgccc
ggcgataactggcgtgtcaccagctactccggtttgcagcagcgtggtcacggtatcgct
caggatctgatgccacggttggatgttgatgccgcaggcgtggtcagcgtcgttgaagta
ccgacgttaacaccgcatcagttcccgcgcggtgcgtcaccggggacattcttgcacagt
ttgtttgaagacctcgattttacccagccggttgacccgaactgggtacaggaaaaactg
gagctcggtggctttgaaccgcagtgggaaccggtgttgactgagtggatcacggctgtc
ctcctggcacctctcaatgaaacgggtattagcctgagtcagctttccgatcgcgataaa
caggtggagatggagttttacctgccaattagcgaaccgctcatcgccagccagcttgat
gcactaattcgccagtttgacccgctatctgctggctgcccgccgctggagttcatgcag
gtacgtggcatgttaaaaggctttatcgatctggtgttccgccacgaagggcgttattac
ctgctcgactataaatccaactggttgggtgaagacagttcggcttacacccaacaggct
atggcagcggcaatgcaggcacaccgctatgatctgcaatatcagctttataccctggcg
ctgcaccgttatctgcgccatcgtattgctgattacgactatgagcgccactttggcggc
gttatttatctgttcctgcgtggcgttgataaagaacatccgcaacaagggatctacgcg
acccgacccaacgccgggttgattgacctgatggatgagatgtttgccggtatgaccctg
gaggaggcgtaa
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