Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_3418
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Entry
EC958_3418 CDS
T04373
Name
(GenBank) putative binding protein YgiS
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Pathway
ecos02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EC958_3418
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecos02000
]
EC958_3418
Transporters [BR:
ecos02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
EC958_3418
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
EAD9
Motif
Other DBs
NCBI-ProteinID:
CDN83763
UniProt:
A0AA36L0J8
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All DBs
Position
complement(3458507..3460177)
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AA seq
556 aa
AA seq
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MSKQCHRRIVVGLIISPVRNTMYTRNLLWLVSLVSAAPLYAADVPANTPLAPQQVFRYNN
HSDPGTLDPQKVEENTAAQIVLDLFEGLVWMDGEGQVQPAQAERWEILDGGKRYIFHLRS
GLQWSDGQPLTAEDFVLGWQRAVDPKTASPFAGYLAQAHINNAAAIVAGKADVTSLGVKA
MDDRTLEVTLEQPVPWFTTMLAWPTLFPVPHHVIAKHGDSWSKPENMVYNGAFVLDKWVV
NEKITARKNPKYRDAQHTVLQQVEYLALDNSVTGYNRYRAGEVDLTWVPAQQIPAIEKSL
PGELRIIPRLNSEYYNFNLEKPPFNDVRVRRALYLTVDRQLIAQKVLGLRTPATTLTPPE
VKGFSATTFDELQKPMSERVAMAKVLLKQAGYDASHPLRFELFYNKYDLHEKTAIALSSE
WKKWLGAQVTLRTMEWKTYLDARRAGDFMLSRQSWDATYNDASSFLNTLKSDSEENVGHW
KNAQYDALLNQAAQTADATKRNALYQQAEVIINQQAPLIPIYYQPLIKLLKPYVGGFPLH
NPQDYVYSKELYIKAH
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaaacaatgccacaggcgtattgttgtcgggcttataatttctccggtaaggaat
accatgtatacgcgaaatttattatggctggtcagcctggtaagtgcggctcctctctac
gctgctgacgttcccgccaacacaccgctcgccccgcaacaagtctttcgttacaacaat
catagcgacccaggcacgctcgacccgcaaaaggtagaggagaataccgccgcgcagatt
gtgctggatctgtttgaaggtctggtatggatggacggtgaaggccaggtgcagcccgct
caggctgaacgctgggagatacttgacggcggcaagcgctatattttccatctgcgtagc
ggtttgcagtggtcagacggtcagcctctgacggcagaggattttgtcctcggctggcag
cgcgcggttgacccgaaaacggcaagcccttttgctggctatctggcacaggcgcacatt
aacaatgccgcggctattgttgcgggtaaagcagatgttacatcgctgggtgtcaaagcg
atggatgatcgtactcttgaagttacgcttgagcagccggttccttggttcacgacgatg
ctcgcctggccgacgctgttcccggttcctcatcatgtcatcgctaaacatggcgatagc
tggagtaagccagagaacatggtttacaacggtgcctttgtgcttgataaatgggtagtt
aacgaaaagattactgcacgcaaaaatccaaagtaccgcgatgcgcaacatacagtattg
caacaggttgagtatctggcgctggataattcggtcaccggctataaccgctatcgcgcg
ggagaggtcgatctcacctgggttccggcgcagcaaattcccgccattgaaaaatcactg
cctggcgagctacgaattatcccgcgtctgaacagcgaatattacaactttaaccttgag
aaaccgccatttaacgatgtgcgggtgcgtcgggcgctatatcttacggttgatcgacag
cttattgcgcaaaaggtactggggttgagaacgcccgcaaccacgctgacgccgccagag
gtaaaaggctttagcgcgacgacgttcgatgaactgcaaaagccaatgagtgagcgcgtc
gcgatggcaaaagtcttgctgaaacaggcgggatacgacgcctctcatccgctacgcttt
gagctgttctacaacaagtacgatctgcatgaaaagaccgcgatagcgttgtcttccgaa
tggaaaaaatggctgggtgcacaggtgacgctgcgcacaatggagtggaaaacctatctt
gatgcccgacgagccggtgattttatgctgtctcggcagtcgtgggatgcgacgtacaat
gatgcctccagcttcctgaacacgctcaaaagcgatagtgaagaaaacgtcggccactgg
aaaaacgcgcagtatgacgccttactaaaccaggcggcacaaacggctgatgcaacaaag
cgtaatgcgctgtatcagcaggcagaagtgatcatcaaccagcaggcaccgctgattccc
atctactatcagccgttaatcaaactgcttaaaccctacgttggcggttttccgctgcat
aatccccaggattatgtctacagcaaagagttgtatatcaaggcacattga
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