Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_3568
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Entry
EC958_3568 CDS
T04373
Symbol
truB
Name
(GenBank) tRNA pseudouridine 5S synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecos03016
]
EC958_3568 (truB)
Enzymes [BR:
ecos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EC958_3568 (truB)
Transfer RNA biogenesis [BR:
ecos03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EC958_3568 (truB)
Prokaryotic type
EC958_3568 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CDN83912
UniProt:
A0AA36L120
LinkDB
All DBs
Position
complement(3608763..3609707)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacattaacggcgttttgttgctggataaaccg
caggggatgtccagcaacgatgcgctgcaaaaagtgaaacggatttataacgccaaccgt
gccgggcataccggtgcgctggacccgctggcgaccggcatgttgccaatttgcctcggg
gaagcgacgaagttttcccagtatctgctggactccgacaaacgttatcgggtcattgcg
cgtcttggacagcgtaccgatacttctgatgccgacggacaaatcgttgaagaacgtccg
gtaacctttagtgcagagcaactggcggcggcgctggataccttccgtggcgatatcgaa
cagattccttcgatgtattcagcactgaaatatcagggcaaaaaactgtacgaatacgcg
cgtcagggcattgaagttccacgtgaagcgcgcccgattaccgtttatgaattgctgttt
attcgccatgaaggcaatgagctggagctggaaattcactgctcaaaaggcacttatatc
cgcactatcattgacgatctcggcgaaaaactcggttgtggcgcgcatgttatttacttg
cgtcgtctggcggtaagtaaatatccggttgaacggatggtgaccctggaacatctgcgt
gaactggttgagcaagccgaacagcaggatattccggctgcggagttacttgacccatta
ctgatgccaatggacagtccagcttcggactacccagtggtgaatcttccgttaacgtct
tctgtttacttcaaaaatggtaacccagttcgtacatccggtgcgccgctggaaggactg
gttcgcgttacagagggtgagaacggcaagtttatcggtatgggcgaaattgacgatgaa
ggccgcgttgcgcctcgtcgcctggtggttgaatacccggcgtaa
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integrated database retrieval system
