Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_4172
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Entry
EC958_4172 CDS
T04373
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecos03032
]
EC958_4172 (gyrB)
03400 DNA repair and recombination proteins [BR:
ecos03400
]
EC958_4172 (gyrB)
Enzymes [BR:
ecos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EC958_4172 (gyrB)
DNA replication proteins [BR:
ecos03032
]
Prokaryotic type
DNA Topoisomerases
EC958_4172 (gyrB)
DNA repair and recombination proteins [BR:
ecos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EC958_4172 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
GyrB_hook
Toprim
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
CDN84532
UniProt:
A0AA36L2J9
LinkDB
All DBs
Position
complement(4236191..4238608)
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AA seq
805 aa
AA seq
DB search
MMSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEI
IVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNV
TEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPN
IFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK
EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAE
YLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSE
LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK
GKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMER
RYPKAMLKELIYQPTLTETDLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNL
FEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASF
EQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTT
LMGDAVEPRRAFIEENALKAANIDI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
ttgatgtcgaattcttatgactcctccagtatcaaagtcctgaaagggctggatgcggtg
cgtaagcgcccgggtatgtatatcggcgacacggatgacggcaccggtctgcaccacatg
gtattcgaggtggtagataacgctatcgacgaagcgctcgcgggtcactgtaaagaaatt
atcgtcaccattcacgccgataactctgtctctgtacaggatgacgggcgcggcattccg
accggtattcacccggaagagggcgtatcggcggcggaagtgatcatgaccgttctgcac
gcaggcggtaaatttgacgataactcctataaagtgtccggcggtctgcacggcgttggt
gtttcggtagtaaacgccctgtcgcaaaaactggagctggttatccagcgcgagggtaaa
attcaccgtcagatctacgaacacggtgtaccgcaggccccgctggcggttaccggcgag
actgaaaaaaccggcaccatggtgcgtttctggccaagccttgaaaccttcaccaatgtg
accgagttcgaatatgaaattctggcgaaacgtctgcgtgagttgtcgttcctcaactcc
ggcgtttccattcgtctgcgcgataagcgcgacggcaaagaagaccacttccactatgaa
ggcggcatcaaggcgttcgttgaatatctgaacaagaacaaaacgccgatccacccgaat
atcttctacttttccaccgaaaaagacggtattggcgtcgaagtggcgttgcagtggaac
gatggcttccaggaaaacatctactgctttaccaacaacattccgcagcgtgacggcggt
actcacctggcaggtttccgtgcggcgatgacccgtactctgaacgcctacatggacaaa
gaaggctacagcaaaaaagccaaagtcagcgccaccggtgacgatgcgcgtgaaggcctg
attgcggtcgtttccgtgaaagtgccggacccgaaattctcctcacagaccaaagacaaa
ctggtttcttctgaggtgaaatcggcggttgaacagcagatgaacgaactgctggcggaa
tacctgctggaaaacccaaccgacgcgaaaatcgtggttggcaaaattatcgatgctgcc
cgtgcccgtgaagcggcgcgtcgcgcgcgtgaaatgactcgccgtaaaggtgcgctcgac
ttagcgggcctgccgggcaaactggcagactgccaggaacgcgacccagcgctttccgaa
ctatacctagtggaaggggactccgcgggcggctctgcgaagcaggggcgtaaccgcaag
aaccaggcgattctgccgctgaagggtaaaatcctcaacgtcgagaaagcgcgcttcgat
aagatgctctcttctcaggaagtggcgacgcttatcaccgcgcttggttgtggtatcggt
cgtgacgagtacaacccggacaaactgcgttatcacagcatcatcatcatgaccgatgcg
gacgtcgacggctcgcacattcgtacgctgctgttgaccttcttctatcgtcagatgccg
gaaatcgttgaacgtggtcacgtctacatcgctcagccgccgctgtacaaagtgaagaaa
ggtaagcaggaacagtacattaaagacgacgaagcgatggatcagtaccagatctctatc
gcgctggatggcgcaacgctgcacaccaacgccagtgcaccggcgctggctggcgaagcg
ttagagaaactggtgtctgagtacaacgcgacgcagaaaatgatcaaccgcatggagcgt
cgttatccgaaagcaatgctgaaagagcttatctatcagccgacgctgacggaaaccgac
ctttctgacgagcaaaccgttacccgctgggtgaacgcgctggtcagcgaactgaacgat
aaagaacagcacggcagccagtggaagtttgatgtccataccaatgccgaacaaaacctg
ttcgagccgattgttcgcgtgcgtacccacggtgtggatactgactatccgctggatcac
gaatttatcactggcggcgaatatcgtcgtatctgcacgctgggtgagaaactgcgtggc
ttgctggaagaagatgcatttatcgaacgtggcgaacgtcgtcagccggtagccagcttc
gagcaggcgctggactggctggtgaaagagtcccgtcgcggcctctccatccagcgttat
aaaggtctgggcgagatgaacccggaacagctgtgggaaaccaccatggacccggaaagc
cgtcgtatgctgcgcgttaccgttaaagatgcgattgctgccgaccagttgttcactacg
cttatgggcgacgccgttgaaccgcgccgtgcgtttatcgaagagaacgctctgaaagcg
gcgaatatcgatatttaa
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